CAZyme3D

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Entry ID

Information for CAZyme ID: AXG81102.1

Basic Information

GenBank IDAXG81102.1
FamilyCBM35
Sequence Length1006
UniProt IDA0A345HWM8(100,100)Download
Average pLDDT?90.02
CAZy50 ID672
CAZy50 RepNo, AXV05032.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2282738
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces paludis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTPRTHVSTT  QRRGPRRLAG  AFLAALLLGG  LAAPGAEADE  KPFADLPPQE  PGVTLRVFDI60
QKPLTKLCDL  KPAQTPNVDK  LLPNIDWSST  EGFGFNDMFV  SQITANLSVP  TDGTYTFRLI120
SDDGSRLFIG  NRKVIDHDGL  HAATPKDGEI  ALAPGYHALR  IDHFDRYNDQ  QVTLQWKPPG180
ATAFTLVPNS  VLSTESGVVR  VTAPGRKECE  GVTDTPGDGL  PLTAVNPGYT  LTDLRPEGFR240
PQVSAMDWLP  DRKLAVTTWG  GSENTTGEVY  LLDQVTGNTG  PDKVTYTKIA  EGLKEPMGIK300
YVDGKLYVSE  KHQLTELSNL  KGLNSPDTIR  KVAEWPYGGN  YHEFAFGLLY  EHGHFYLNLS360
VSINHGGATT  RPQPAVNRGT  AIKVNKRTGK  VTYLAGGLRT  PNGIGKGPNG  ALFVTDNQGG420
WLPASKLLHI  KKERFFNHFT  EPAGPYDDRT  ATKPVLWLPQ  NEIANSPSTP  MLLEKGPFAG480
QMLIGDVTYG  GLQRADLEKV  KGEYQGALFR  HTQGLEAGVS  RISTGPDGAI  YVGGLGAEGN540
WGQTGKLRYG  LQKLTPNGEN  PFDIKTMRAT  RDGFELTYTQ  PLSEETAAKL  ANGAYSVEQW600
RYVPTPSYGG  PKIDEEVLPV  TAARLSGDGR  KVRLTIPGLK  TDRVVHLRSP  RPFASATGEA660
LWSTEAWYTL  NARPGPEEPV  TSYDAESGRL  TGGADRDTEH  AGYTGGGFVD  GFGVKGATVT720
LDINVPAEGA  YDVALRYANG  PNPFTGTKTL  GVSVNGGEVR  QTSLPHTGAW  NRWATKTERF780
TLRKGHNTLT  YANRPEDTGH  INLDMVEVRP  PGSRIDLFSG  GSLATDWQHT  DGRSTTWPHT840
AENSVEVASG  DIRTKRAFGD  FKLHAEFRVP  LMPDDVTGQA  RGNSGIFLQE  RYEIQILDSF900
GTAGPGLDTA  GSIYNKKAAD  RNMATAPETW  QTYDIEFRAA  RYDTDGRKTE  NARISVVWNG960
VLVHDKVAVD  GPTGSGNAEL  AATGAIRLQD  HGDKVRFRNV  WIEPLE1006

Predicted 3D structure by AlphaFold2 with pLDDT = 90.02 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM35(683-808)

MTPRTHVSTT  QRRGPRRLAG  AFLAALLLGG  LAAPGAEADE  KPFADLPPQE  PGVTLRVFDI60
QKPLTKLCDL  KPAQTPNVDK  LLPNIDWSST  EGFGFNDMFV  SQITANLSVP  TDGTYTFRLI120
SDDGSRLFIG  NRKVIDHDGL  HAATPKDGEI  ALAPGYHALR  IDHFDRYNDQ  QVTLQWKPPG180
ATAFTLVPNS  VLSTESGVVR  VTAPGRKECE  GVTDTPGDGL  PLTAVNPGYT  LTDLRPEGFR240
PQVSAMDWLP  DRKLAVTTWG  GSENTTGEVY  LLDQVTGNTG  PDKVTYTKIA  EGLKEPMGIK300
YVDGKLYVSE  KHQLTELSNL  KGLNSPDTIR  KVAEWPYGGN  YHEFAFGLLY  EHGHFYLNLS360
VSINHGGATT  RPQPAVNRGT  AIKVNKRTGK  VTYLAGGLRT  PNGIGKGPNG  ALFVTDNQGG420
WLPASKLLHI  KKERFFNHFT  EPAGPYDDRT  ATKPVLWLPQ  NEIANSPSTP  MLLEKGPFAG480
QMLIGDVTYG  GLQRADLEKV  KGEYQGALFR  HTQGLEAGVS  RISTGPDGAI  YVGGLGAEGN540
WGQTGKLRYG  LQKLTPNGEN  PFDIKTMRAT  RDGFELTYTQ  PLSEETAAKL  ANGAYSVEQW600
RYVPTPSYGG  PKIDEEVLPV  TAARLSGDGR  KVRLTIPGLK  TDRVVHLRSP  RPFASATGEA660
LWSTEAWYTL  NARPGPEEPV  TSYDAESGRL  TGGADRDTEH  AGYTGGGFVD  GFGVKGATVT720
LDINVPAEGA  YDVALRYANG  PNPFTGTKTL  GVSVNGGEVR  QTSLPHTGAW  NRWATKTERF780
TLRKGHNTLT  YANRPEDTGH  INLDMVEVRP  PGSRIDLFSG  GSLATDWQHT  DGRSTTWPHT840
AENSVEVASG  DIRTKRAFGD  FKLHAEFRVP  LMPDDVTGQA  RGNSGIFLQE  RYEIQILDSF900
GTAGPGLDTA  GSIYNKKAAD  RNMATAPETW  QTYDIEFRAA  RYDTDGRKTE  NARISVVWNG960
VLVHDKVAVD  GPTGSGNAEL  AATGAIRLQD  HGDKVRFRNV  WIEPLE1006

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help