Information for CAZyme ID: AXB41213.1
Basic Information
GenBank ID | AXB41213.1 |
Family | CBM35 |
Sequence Length | 987 |
UniProt ID | A0A344KZI9(100,100)![]() |
Average pLDDT? | 92.59 |
CAZy50 ID | 672 |
CAZy50 Rep | No, AXV05032.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1804986 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Pseudonocardiales |
Family | Pseudonocardiaceae |
Genus | Amycolatopsis |
Species | Amycolatopsis albispora |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRLFVALLAL VLTIGVATPA TAQSGIPPQE PGVTMRVFDV QVPLEEYCTL KPSQTPNIDK | 60 |
LMPVIDWTTT ADFGIADRFV TEVTGYLNVG APGRYDFRLT SDDGARLFLG ETKVIDHGGR | 120 |
HGATPKDGSI DLTAGAHALR IDHFDADFDQ RLKLEWKPPG ATAFTLVPTS ALSTDEGVTR | 180 |
VTSPGRKECE GVTESPGDGL PLTSVHPGYA LTNLRPEGFE PQVTGMDWLP DNRLAISTWG | 240 |
GARESVRGEV YLLDGVTGAT DPSKVKPKKI AEGLQEPMGI KYVDGTLYVS EKKGLTALVD | 300 |
TNGDEVTDEY RTIATWPFGG NYHEFAFGLL YQNGYFYVST GIAMVPGGAS LDPQPAANRG | 360 |
STLKIDKATG KVSYVAGGLR TPNGLGWGPE GDIFVTDNQG AYLPTSKLVR IKQGRFFNHH | 420 |
TNPDGPFDDQ PVTQPVLWLP HGEISNSPSN PLVLPDGPFA GQMVFGDVTY GGLQRAHLEK | 480 |
VGDDYQGAVF RMTQGLESGV SRISLGPDGA IYTGGIGSEG NWGQAGKLKY GLQKLSLSNA | 540 |
DAFDMLAMRA IDGGFEIEYT QPLSEATAQD LAAKYNVSQW RYVATPQYGG PKVDEETLRV | 600 |
GSAALSADRK KVTLKIDGLK PGRVVHVHSP RPFAAESGQE LWSTEAWYTL NTLPNGATAP | 660 |
PEYEAESAQL AGGTGFNTNH SGYSGAGFVD RNWEPGTSTT FAVNAARGGR HDLALRYANG | 720 |
LNPSPNPVTK SMSLYVNGRK EKQVWLASTG AWNQWATHVE SVVLRTGANK ISFVYEPTDS | 780 |
GHVNLDKLTV TPTQRITLFD GSSLDAWEAT AGGPAKWPVA NGSMESFGGD IRTREKFGDF | 840 |
RMHAEWYQPQ YPPGQTGQAR GNSGVYIQER YEIQVLDSFG IEPPKTNDAG AIYLKKAPDV | 900 |
NAATAPGTWQ TYDIIFRAAR YDSSGKKVAD ARVSLWWNGK LVHDDVAIDG PTGAGRPEDP | 960 |
SAGHIRLQDH GDPGENPRFR NVWIERM | 987 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.59 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM35(663-790)
MRLFVALLAL VLTIGVATPA TAQSGIPPQE PGVTMRVFDV QVPLEEYCTL KPSQTPNIDK | 60 |
LMPVIDWTTT ADFGIADRFV TEVTGYLNVG APGRYDFRLT SDDGARLFLG ETKVIDHGGR | 120 |
HGATPKDGSI DLTAGAHALR IDHFDADFDQ RLKLEWKPPG ATAFTLVPTS ALSTDEGVTR | 180 |
VTSPGRKECE GVTESPGDGL PLTSVHPGYA LTNLRPEGFE PQVTGMDWLP DNRLAISTWG | 240 |
GARESVRGEV YLLDGVTGAT DPSKVKPKKI AEGLQEPMGI KYVDGTLYVS EKKGLTALVD | 300 |
TNGDEVTDEY RTIATWPFGG NYHEFAFGLL YQNGYFYVST GIAMVPGGAS LDPQPAANRG | 360 |
STLKIDKATG KVSYVAGGLR TPNGLGWGPE GDIFVTDNQG AYLPTSKLVR IKQGRFFNHH | 420 |
TNPDGPFDDQ PVTQPVLWLP HGEISNSPSN PLVLPDGPFA GQMVFGDVTY GGLQRAHLEK | 480 |
VGDDYQGAVF RMTQGLESGV SRISLGPDGA IYTGGIGSEG NWGQAGKLKY GLQKLSLSNA | 540 |
DAFDMLAMRA IDGGFEIEYT QPLSEATAQD LAAKYNVSQW RYVATPQYGG PKVDEETLRV | 600 |
GSAALSADRK KVTLKIDGLK PGRVVHVHSP RPFAAESGQE LWSTEAWYTL NTLPNGATAP | 660 |
PEYEAESAQL AGGTGFNTNH SGYSGAGFVD RNWEPGTSTT FAVNAARGGR HDLALRYANG | 720 |
LNPSPNPVTK SMSLYVNGRK EKQVWLASTG AWNQWATHVE SVVLRTGANK ISFVYEPTDS | 780 |
GHVNLDKLTV TPTQRITLFD GSSLDAWEAT AGGPAKWPVA NGSMESFGGD IRTREKFGDF | 840 |
RMHAEWYQPQ YPPGQTGQAR GNSGVYIQER YEIQVLDSFG IEPPKTNDAG AIYLKKAPDV | 900 |
NAATAPGTWQ TYDIIFRAAR YDSSGKKVAD ARVSLWWNGK LVHDDVAIDG PTGAGRPEDP | 960 |
SAGHIRLQDH GDPGENPRFR NVWIERM | 987 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.