CAZyme3D

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Entry ID

Information for CAZyme ID: AWW36417.1

Basic Information

GenBank IDAWW36417.1
FamilyGH85
Sequence Length670
UniProt IDA0A2Z4IUI6(100,100)Download
Average pLDDT?93.42
CAZy50 ID30455
CAZy50 RepNo, UKW28111.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2184053
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces cadmiisoli

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNPTRRTVLL  AGAAAALLPG  VPAAAAPREA  AASLQPYASY  WYPDSLPPGT  PGTGITWRSL60
KAWRAADDPD  LALNAASVPL  APRFTPTPAS  PTARTDQARI  QSLVSFGPTS  GNPSQGSATA120
DYYALTHWAL  IDELVFWGGS  SGEGLILAPN  APIVDAAHRH  GVRVLGNVFL  PPAAYGGQLQ180
WTRDLVQRDA  AGRCPLAARL  VAVAAAYGFD  GWFVNAETGG  GDAALGRDMQ  FFMRELKSLA240
AAHGQRVTWY  DSMTVNGNVS  WQGALDTQNQ  PFFLAADDMF  VDFRWTPGSL  VSSGRLADRL300
GRSRYELWAG  VDVEANGWNA  SVDWDAIVPT  GAPHITSLGF  YRPEWTRNHL  PADGRAPADF360
HAADDRFWTG  RSLDPSRPDA  TDRWRAPATV  VADRSTVVSV  PFASAFNTGH  GLRWYEEGRV420
TSDTPWNHLG  LQDRLPSRRW  VVRTDGTRPA  VNFDFADAWR  GGSSVLVDGA  LDAATTVDVY480
ATRLPVGDDT  VLELTHRTDA  GAVDVELAVA  TAEPSAPGAT  PPYTWLPVDS  GDRWQTVTVP540
HTGLSGTIRS  IAVRLTPVDP  GRPVRWRLGA  LAVRAARPGP  PAAPTAFRVT  AASADQLRFG600
WQPAPGDVRH  YTVHRLLPDG  TRRFLGGTCQ  RAHHVGGLRP  EQGERSARFE  LRSVGELYNA660
SDPVTVHHTW  670

Predicted 3D structure by AlphaFold2 with pLDDT = 93.42 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH85(109-415)

MNPTRRTVLL  AGAAAALLPG  VPAAAAPREA  AASLQPYASY  WYPDSLPPGT  PGTGITWRSL60
KAWRAADDPD  LALNAASVPL  APRFTPTPAS  PTARTDQARI  QSLVSFGPTS  GNPSQGSATA120
DYYALTHWAL  IDELVFWGGS  SGEGLILAPN  APIVDAAHRH  GVRVLGNVFL  PPAAYGGQLQ180
WTRDLVQRDA  AGRCPLAARL  VAVAAAYGFD  GWFVNAETGG  GDAALGRDMQ  FFMRELKSLA240
AAHGQRVTWY  DSMTVNGNVS  WQGALDTQNQ  PFFLAADDMF  VDFRWTPGSL  VSSGRLADRL300
GRSRYELWAG  VDVEANGWNA  SVDWDAIVPT  GAPHITSLGF  YRPEWTRNHL  PADGRAPADF360
HAADDRFWTG  RSLDPSRPDA  TDRWRAPATV  VADRSTVVSV  PFASAFNTGH  GLRWYEEGRV420
TSDTPWNHLG  LQDRLPSRRW  VVRTDGTRPA  VNFDFADAWR  GGSSVLVDGA  LDAATTVDVY480
ATRLPVGDDT  VLELTHRTDA  GAVDVELAVA  TAEPSAPGAT  PPYTWLPVDS  GDRWQTVTVP540
HTGLSGTIRS  IAVRLTPVDP  GRPVRWRLGA  LAVRAARPGP  PAAPTAFRVT  AASADQLRFG600
WQPAPGDVRH  YTVHRLLPDG  TRRFLGGTCQ  RAHHVGGLRP  EQGERSARFE  LRSVGELYNA660
SDPVTVHHTW  670

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help