CAZyme3D

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Entry ID

Information for CAZyme ID: AWS63168.1

Basic Information

GenBank IDAWS63168.1
FamilyGT35
Sequence Length797
UniProt IDA0A2V2ILD0(100,100)Download
Average pLDDT?98.02
CAZy50 ID18604
CAZy50 RepNo, AWB67567.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID562
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSQPIFNDKQ  FQEALSRQWQ  RYGLNSAAEM  TPRQWWLAVS  EALAEMLRAQ  PFAKPVANQR60
HVNYISMEFL  IGRLTGNNLL  NLGWYQDVQD  SLKAYDINLT  DLLEEEIDPA  LGNGGLGRLA120
ACFLDSMATV  GQSATGYGLN  YQYGLFRQSF  VDGKQVEAPD  DWHRSNYPWF  RHNEALDVQV180
GIGGKVTKDG  RWEPEFTITG  QAWDLPVVGY  RNGVAQPLRL  WQATHAHPFD  LTKFNDGDFL240
RAEQQGINAE  KLTKVLYPND  NHTAGKKLRL  MQQYFQCACS  VADILRRHHL  AGRKLHELAD300
YEVIQLNDTH  PTIAIPELLR  VLIDEHQMSW  DDAWAITSKT  FAYTNHTLMP  EALERWDVKL360
VKGLLPRHMQ  IINEINTRFK  TLVEKTWPGD  EKVWAKLAVV  HDKQVHMANL  CVVGGFAVNG420
VAALHSDLVV  KDLFPEYHQL  WPNKFHNVTN  GITPRRWIKQ  CNPALAALLD  KSLQKEWAND480
LDQLINLEKF  ADDAKFRQQY  REIKQANKVR  LAEFVKVRTG  IEINPQAIFD  IQIKRLHEYK540
RQHLNLLHIL  ALYKEIRENP  QADRVPRVFL  FGAKAAPGYY  LAKNIIFAIN  KVADVINNDP600
LVGDKLKVVF  LPDYCVSAAE  KLIPAADISE  QISTAGKEAS  GTGNMKLALN  GALTVGTLDG660
ANVEIAEKVG  EENIFIFGHT  VEQVKAILAK  GYDPVKWRKK  DKVLDAVLKE  LESGKYSDGD720
KHAFDQMLHS  IGKQGGDPYL  VMADFAAYVE  AQKQVDVLYC  DQEAWTRAAI  LNTARCGMFS780
SDRSIRDYQA  RIWQAKR797

Predicted 3D structure by AlphaFold2 with pLDDT = 98.02 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT35(92-795)

MSQPIFNDKQ  FQEALSRQWQ  RYGLNSAAEM  TPRQWWLAVS  EALAEMLRAQ  PFAKPVANQR60
HVNYISMEFL  IGRLTGNNLL  NLGWYQDVQD  SLKAYDINLT  DLLEEEIDPA  LGNGGLGRLA120
ACFLDSMATV  GQSATGYGLN  YQYGLFRQSF  VDGKQVEAPD  DWHRSNYPWF  RHNEALDVQV180
GIGGKVTKDG  RWEPEFTITG  QAWDLPVVGY  RNGVAQPLRL  WQATHAHPFD  LTKFNDGDFL240
RAEQQGINAE  KLTKVLYPND  NHTAGKKLRL  MQQYFQCACS  VADILRRHHL  AGRKLHELAD300
YEVIQLNDTH  PTIAIPELLR  VLIDEHQMSW  DDAWAITSKT  FAYTNHTLMP  EALERWDVKL360
VKGLLPRHMQ  IINEINTRFK  TLVEKTWPGD  EKVWAKLAVV  HDKQVHMANL  CVVGGFAVNG420
VAALHSDLVV  KDLFPEYHQL  WPNKFHNVTN  GITPRRWIKQ  CNPALAALLD  KSLQKEWAND480
LDQLINLEKF  ADDAKFRQQY  REIKQANKVR  LAEFVKVRTG  IEINPQAIFD  IQIKRLHEYK540
RQHLNLLHIL  ALYKEIRENP  QADRVPRVFL  FGAKAAPGYY  LAKNIIFAIN  KVADVINNDP600
LVGDKLKVVF  LPDYCVSAAE  KLIPAADISE  QISTAGKEAS  GTGNMKLALN  GALTVGTLDG660
ANVEIAEKVG  EENIFIFGHT  VEQVKAILAK  GYDPVKWRKK  DKVLDAVLKE  LESGKYSDGD720
KHAFDQMLHS  IGKQGGDPYL  VMADFAAYVE  AQKQVDVLYC  DQEAWTRAAI  LNTARCGMFS780
SDRSIRDYQA  RIWQAKR797

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help