CAZyme3D

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Entry ID

Information for CAZyme ID: AWR93415.1

Basic Information

GenBank IDAWR93415.1
FamilyGT5
Sequence Length565
UniProt IDA0A2U9IBM8(100,100)Download
Average pLDDT?95.22
CAZy50 ID56635
CAZy50 RepNo, QGR19082.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID41673
KingdomArchaea
PhylumThermoproteota
ClassThermoprotei
OrderSulfolobales
FamilySulfolobaceae
GenusAcidianus
SpeciesAcidianus brierleyi

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKRIESFWIP  DKVDKVWMIT  FELLNIASMG  GLGNAVYNLS  KALVNNGINV  TVIMPSHGRH60
LNDYYRNKLR  LTEMPIAAIG  NRKGSDGNSY  PYKLGFEKGE  LDGIKIVLVK  GLDYTSGKIM120
DSWEIYDYTM  EKSALLARAL  ESYVSSIQFN  DIPSIIHVND  WHSVLAGVKA  KFAFEERRII180
VPLMYTIHLL  NKVGAPWHFA  SEDWAGLENY  DHYIWMVSRH  VLYKTRTLWD  MCDGKIEKFG240
CYEADSIASV  SKNYLTYDVF  QFVGNMMENK  SCVTYNGTDW  TIQEIEDYAR  KNLGTTNRKE300
IRSRLFSSLP  NMKVIPDDYS  SGNMLWNNRW  RIGIRDDWTY  EALQDGPLVI  FTGRIVYQKG360
IDLLLRAFRQ  VVNEIWNAKL  VVLGIPAGDY  GLLQDVIDRS  AEIKDNVRLI  IGKLDFNIYK420
LWHYASSVFA  VPSRWEPFGI  NAIESMAVGT  PVVASSLGGL  SESIIDVRWS  PEGTGFLSEP480
NSIDSLAKLL  KNAIYLSLAE  EYGDSNYLNK  ADLVKVSDVK  FWSKVRQNCI  NRVDANFRWN540
VVAKEALNCY  EKSILMAKYR  GLAFM565

Predicted 3D structure by AlphaFold2 with pLDDT = 95.22 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT5(15-552)

MKRIESFWIP  DKVDKVWMIT  FELLNIASMG  GLGNAVYNLS  KALVNNGINV  TVIMPSHGRH60
LNDYYRNKLR  LTEMPIAAIG  NRKGSDGNSY  PYKLGFEKGE  LDGIKIVLVK  GLDYTSGKIM120
DSWEIYDYTM  EKSALLARAL  ESYVSSIQFN  DIPSIIHVND  WHSVLAGVKA  KFAFEERRII180
VPLMYTIHLL  NKVGAPWHFA  SEDWAGLENY  DHYIWMVSRH  VLYKTRTLWD  MCDGKIEKFG240
CYEADSIASV  SKNYLTYDVF  QFVGNMMENK  SCVTYNGTDW  TIQEIEDYAR  KNLGTTNRKE300
IRSRLFSSLP  NMKVIPDDYS  SGNMLWNNRW  RIGIRDDWTY  EALQDGPLVI  FTGRIVYQKG360
IDLLLRAFRQ  VVNEIWNAKL  VVLGIPAGDY  GLLQDVIDRS  AEIKDNVRLI  IGKLDFNIYK420
LWHYASSVFA  VPSRWEPFGI  NAIESMAVGT  PVVASSLGGL  SESIIDVRWS  PEGTGFLSEP480
NSIDSLAKLL  KNAIYLSLAE  EYGDSNYLNK  ADLVKVSDVK  FWSKVRQNCI  NRVDANFRWN540
VVAKEALNCY  EKSILMAKYR  GLAFM565

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help