CAZyme3D

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Entry ID

Information for CAZyme ID: AWN65103.1

Basic Information

GenBank IDAWN65103.1
FamilyGT51
Sequence Length664
UniProt IDA0A2Z3KL63(100,100)Download
Average pLDDT?91.17
CAZy50 ID38913
CAZy50 RepNo, AYF99640.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1360
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusLactococcus
SpeciesLactococcus lactis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MWTAVKLFLI  AFFSLIILAL  AAGGAVFVYY  AKDAPALTLD  KLESKPSTKV  YDSSEKVVAT60
LGAEQRNLVK  TDNIPVMLVN  AVTSIEDHRF  FNTRGIDPIR  IAGAFVNNLK  GGSLNGGSTL120
DMQLIKLSFF  STDESDQTLS  VKIQEAWMAL  KLDQKWTKEQ  IFTAYVNKVN  MANGYYGMGT180
ASQAYYGKDL  TQLSIAQLAL  LAGMPQAPNT  YNPYTNPTSA  KWRRDMVIRA  MRRYDKITAE240
EEKKALATPI  DDGLQPLKQS  VTIPSYADNF  LKQAIAQAKT  LAGDDILTEG  AKIYTTLDTT300
AQQNLYNIVN  TGNYITYPDD  TMQVASTVTD  VKTGAVIAQI  GGRNQPSNVT  FGFNQAVQTD360
RDWGSTMKPI  VDYGPAFENN  IYTSTNNYVS  DSPTTYPNGT  PLKNWDNTYF  GSMTVKSALA420
LSRNIPAVKT  LINVGLDNSS  KFVNGLGITL  DPLEYSNAIS  SNSKNGGASS  EKMAAAYAAF480
SNGGIYTKPY  YVSKVVFPDG  RTVEYKPVRS  RAMQASTAYI  MTNILQSVLT  LPLSESVGSY540
AAVPGLAAAG  KTGTSNYTDS  EMDQITEKYG  SLPGMVSPDE  NFVGYTPQYS  MAVWTGYSNR600
MTPIYGTSTQ  IATKVFSAMM  TQLTPDPSSV  ATWTMPEGVS  QEGTALVKTD  SSGQTISQSS660
ANGS664

Predicted 3D structure by AlphaFold2 with pLDDT = 91.17 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(56-231)

MWTAVKLFLI  AFFSLIILAL  AAGGAVFVYY  AKDAPALTLD  KLESKPSTKV  YDSSEKVVAT60
LGAEQRNLVK  TDNIPVMLVN  AVTSIEDHRF  FNTRGIDPIR  IAGAFVNNLK  GGSLNGGSTL120
DMQLIKLSFF  STDESDQTLS  VKIQEAWMAL  KLDQKWTKEQ  IFTAYVNKVN  MANGYYGMGT180
ASQAYYGKDL  TQLSIAQLAL  LAGMPQAPNT  YNPYTNPTSA  KWRRDMVIRA  MRRYDKITAE240
EEKKALATPI  DDGLQPLKQS  VTIPSYADNF  LKQAIAQAKT  LAGDDILTEG  AKIYTTLDTT300
AQQNLYNIVN  TGNYITYPDD  TMQVASTVTD  VKTGAVIAQI  GGRNQPSNVT  FGFNQAVQTD360
RDWGSTMKPI  VDYGPAFENN  IYTSTNNYVS  DSPTTYPNGT  PLKNWDNTYF  GSMTVKSALA420
LSRNIPAVKT  LINVGLDNSS  KFVNGLGITL  DPLEYSNAIS  SNSKNGGASS  EKMAAAYAAF480
SNGGIYTKPY  YVSKVVFPDG  RTVEYKPVRS  RAMQASTAYI  MTNILQSVLT  LPLSESVGSY540
AAVPGLAAAG  KTGTSNYTDS  EMDQITEKYG  SLPGMVSPDE  NFVGYTPQYS  MAVWTGYSNR600
MTPIYGTSTQ  IATKVFSAMM  TQLTPDPSSV  ATWTMPEGVS  QEGTALVKTD  SSGQTISQSS660
ANGS664

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help