Information for CAZyme ID: AWN54337.1
Basic Information
| GenBank ID | AWN54337.1 |
| Family | GT2 |
| Sequence Length | 815 |
| UniProt ID | A0A2U8X7J9(100,100) |
| Average pLDDT? | 86.35 |
| CAZy50 ID | 17015 |
| CAZy50 Rep | No, AWN53353.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2202826 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylobacterium |
| Species | Methylobacterium sp. 17Sr1-1 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTGVVRVLRW LAWMGTTAAG LALLSQPVGT QNQLAMSLAA MAAMAGLWLV FDGPRTRFVF | 60 |
| LAMGSLVVLR YILWRVTDTL PSPGDPVSFG FGLLLLLCEL YCVFILFVSL IINAEPLRRP | 120 |
| PPAALPAADL PSVDVFVPSY NEDAEILAMT LAAARQMNYS PEKLTVWLLD DGGTDQKCAD | 180 |
| PDPEKAQAAR DRRAALQALC RDLDARYLTR ARNEHAKAGN LNNGLASATG DLVLVLDADH | 240 |
| VPFRSLLAET VGYFAEDPKL FLVQTPHAFL NPDPIERNLK TFERMPSENE MFYAVTQAGL | 300 |
| DKWNGSFFCG SAALLRRTAL DEAGGFAGIT ITEDCETAFE LHSRGWTSAY VDKPLIAGLQ | 360 |
| PDTLADFIGQ RSRWCQGMFQ ILLLKNPALQ RGLKPIQKLA YLSSMTFWFF PVPRLVFMFA | 420 |
| PLLHIFFDLK IFVASVDESI AYTATYIVIN LMMQNYVYGK FRWPFVSELY EYVQGLYLSK | 480 |
| AIVSVIWSPR KPTFNVTNKG ATLDHDHLSA LSLPFFAVYG LLLTGCVVAA WRYLFEPGVT | 540 |
| NLMLVVGLWN LFNLLTAGAA LGVCAERRQL ERTPSLPITR RGQLTLGGRA VDVAIERVSA | 600 |
| EACTVRMPAA FLAPGAGHRP VPGTLTVVPV AGARPAGALP VVLGPVTRSG ADAVCRLAFG | 660 |
| TLRPQDYVAL AGLMYGDAEA MRRFQLRRRR HKDLFTGTLQ FVWWGFSEPV RALRYALAGE | 720 |
| RRPMPVEASE VGPVYDEPVR DAVPPQPVDL PLAPLARPTL PIRTQAHASA QPQPQAHAQA | 780 |
| ATRAETEDDG DWVRLMLDFE NDRALAARGR RTDAA | 815 |
Predicted 3D structure by AlphaFold2 with pLDDT = 86.35 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT2(134-322)+GT2(233-426)
| MTGVVRVLRW LAWMGTTAAG LALLSQPVGT QNQLAMSLAA MAAMAGLWLV FDGPRTRFVF | 60 |
| LAMGSLVVLR YILWRVTDTL PSPGDPVSFG FGLLLLLCEL YCVFILFVSL IINAEPLRRP | 120 |
| PPAALPAADL PSVDVFVPSY NEDAEILAMT LAAARQMNYS PEKLTVWLLD DGGTDQKCAD | 180 |
| PDPEKAQAAR DRRAALQALC RDLDARYLTR ARNEHAKAGN LNNGLASATG DLVLVLDADH | 240 |
| VPFRSLLAET VGYFAEDPKL FLVQTPHAFL NPDPIERNLK TFERMPSENE MFYAVTQAGL | 300 |
| DKWNGSFFCG SAALLRRTAL DEAGGFAGIT ITEDCETAFE LHSRGWTSAY VDKPLIAGLQ | 360 |
| PDTLADFIGQ RSRWCQGMFQ ILLLKNPALQ RGLKPIQKLA YLSSMTFWFF PVPRLVFMFA | 420 |
| PLLHIFFDLK IFVASVDESI AYTATYIVIN LMMQNYVYGK FRWPFVSELY EYVQGLYLSK | 480 |
| AIVSVIWSPR KPTFNVTNKG ATLDHDHLSA LSLPFFAVYG LLLTGCVVAA WRYLFEPGVT | 540 |
| NLMLVVGLWN LFNLLTAGAA LGVCAERRQL ERTPSLPITR RGQLTLGGRA VDVAIERVSA | 600 |
| EACTVRMPAA FLAPGAGHRP VPGTLTVVPV AGARPAGALP VVLGPVTRSG ADAVCRLAFG | 660 |
| TLRPQDYVAL AGLMYGDAEA MRRFQLRRRR HKDLFTGTLQ FVWWGFSEPV RALRYALAGE | 720 |
| RRPMPVEASE VGPVYDEPVR DAVPPQPVDL PLAPLARPTL PIRTQAHASA QPQPQAHAQA | 780 |
| ATRAETEDDG DWVRLMLDFE NDRALAARGR RTDAA | 815 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.