Information for CAZyme ID: AWN32888.1
Basic Information
GenBank ID | AWN32888.1 |
Family | GH32 |
Sequence Length | 773 |
UniProt ID | A0A2Z3K4W1(100,100)![]() |
Average pLDDT? | 81.11 |
CAZy50 ID | 28326 |
CAZy50 Rep | No, WEV39984.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1218494 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Lactobacillales |
Family | Lactobacillaceae |
Genus | Lactobacillus |
Species | Lactobacillus helsingborgensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKCSKYRFIT QITVATLLGL SLKVLSTTNA KAAQIDVPAV LIQQKDFEQK GQDPLLNGKY | 60 |
VSNGYTDGGY TYLNPSDTSP ERESSYHLDT DEGWSNDLQT IVYDNANKEW VIYYLHTAKV | 120 |
INGDAGAQQN WQRVTTKDFI HFSQPAIAIK DLKGDIGDAW SSAWTGSIIV NAGNIAGVPK | 180 |
GAQVAFFSGL SNKDNQQNIW AAWSDDNGKT FAHPLNDKKI ILDHYWPWTS INRSDERDPA | 240 |
VFYWHNKLIM YVAEGDNIGV YQSDDGLNWS NANGNQADSK IDSSTFFKGL PFEAPVECPA | 300 |
LRSMKTAGGE TKQVLFFGAK APQAKQTTGT YYIVGHLDDK GMFTPETEAK RLDQGTDYYG | 360 |
ANFSGNYDLE KADDSLISMG WIGNWNYTNS GIKANQEGFL PNSTRIGTYS LARKISLNDD | 420 |
LTITSVPLTT GLEEKNVQKS VGKVASQKPI ANDYYSLLNL KKQPANSKYV LHFSTKDQSA | 480 |
YQGAVRLVLN QGQDNNILIF DPATGKYRLD GVSSELSGNA ASYYKNGYES GMGYINDSGL | 540 |
KGSSEFTITV YTDKNAIEIF FENGQAATVA RFCVNNVQDV QIDAQDESKK NQYEINYGQV | 600 |
GKDLIGFEEK PAASESGGST SSGNNVINTE TPTVNSPVTN KPDANKETDN SAKKKQAQKR | 660 |
VVMHNSWVYH SNGKKSFLKI NAGATISTYG VTEIKGKKYY ILASDKYILA TNVTGKKRQL | 720 |
RHNTFVYNQK GQRIKRYYFK KGKKLVTFGG SVKLKHKAFY IIGKNMYVKR ANF | 773 |
Predicted 3D structure by AlphaFold2 with pLDDT = 81.11 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH32(87-420)
MKCSKYRFIT QITVATLLGL SLKVLSTTNA KAAQIDVPAV LIQQKDFEQK GQDPLLNGKY | 60 |
VSNGYTDGGY TYLNPSDTSP ERESSYHLDT DEGWSNDLQT IVYDNANKEW VIYYLHTAKV | 120 |
INGDAGAQQN WQRVTTKDFI HFSQPAIAIK DLKGDIGDAW SSAWTGSIIV NAGNIAGVPK | 180 |
GAQVAFFSGL SNKDNQQNIW AAWSDDNGKT FAHPLNDKKI ILDHYWPWTS INRSDERDPA | 240 |
VFYWHNKLIM YVAEGDNIGV YQSDDGLNWS NANGNQADSK IDSSTFFKGL PFEAPVECPA | 300 |
LRSMKTAGGE TKQVLFFGAK APQAKQTTGT YYIVGHLDDK GMFTPETEAK RLDQGTDYYG | 360 |
ANFSGNYDLE KADDSLISMG WIGNWNYTNS GIKANQEGFL PNSTRIGTYS LARKISLNDD | 420 |
LTITSVPLTT GLEEKNVQKS VGKVASQKPI ANDYYSLLNL KKQPANSKYV LHFSTKDQSA | 480 |
YQGAVRLVLN QGQDNNILIF DPATGKYRLD GVSSELSGNA ASYYKNGYES GMGYINDSGL | 540 |
KGSSEFTITV YTDKNAIEIF FENGQAATVA RFCVNNVQDV QIDAQDESKK NQYEINYGQV | 600 |
GKDLIGFEEK PAASESGGST SSGNNVINTE TPTVNSPVTN KPDANKETDN SAKKKQAQKR | 660 |
VVMHNSWVYH SNGKKSFLKI NAGATISTYG VTEIKGKKYY ILASDKYILA TNVTGKKRQL | 720 |
RHNTFVYNQK GQRIKRYYFK KGKKLVTFGG SVKLKHKAFY IIGKNMYVKR ANF | 773 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.