Information for CAZyme ID: AWM13124.1
Basic Information
| GenBank ID | AWM13124.1 |
| Family | CBM48, GH13 |
| Sequence Length | 901 |
| UniProt ID | A0A2U8QTF0(100,100) |
| Average pLDDT? | 90.27 |
| CAZy50 ID | 10090 |
| CAZy50 Rep | No, UFH35986.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2201181 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sediminis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MFRNYICPYR SNFKRKCLAK CNRELGDNTA QPSLTLVSGN IYKLDLTSTI ENFYSVSSGT | 60 |
| ISKINIVLRS ADGTQQTADL EINVGSFQST LISPSENSTT ILNSGDNLSI SASNTNGNAD | 120 |
| YTLLANGVSL NTFTGSTYNY TDTNITTNKN YELQITQGGI TQSKYFSVVI NPGVLSENLP | 180 |
| ANTVIGINYD NSDTTKATLV LNAPGKEFIY VAGSFNNWQP SSAYAMKKDP SSDKFWIELV | 240 |
| GLTPGQVYTY QYWVFDTTPT TNSQILVKTA DPCSTLVLSP YDDPYIPSGS FPDLATTYAY | 300 |
| PAGQEREVTV LQTGQTPYNW QVTNFTKPSK DNLVVYEVLV RDFDADRNYQ DLIDKVNYFK | 360 |
| NLGVNAIELM PVMEFEGNES WGYNTSFHMA LDKYYGTSDK LKEFVDLCHQ NGIAVILDIA | 420 |
| FNHAFGRNPM VRMWMNDPDG DGWGGPNTDN PYFNTIAKHS YSVGEDFNHT SADTKEYVKR | 480 |
| TVQYWIEEFK IDGFRWDLTK GFTQACTASD ETCTNAYQQD RVDILKDYAD FSWSIDPDHY | 540 |
| VIFEHLGTDA EEQQWANYRL NEGKGIMMWG EMFYNYSQLA KGYATNADIT RMGHVSRGFS | 600 |
| GKRLMGYPES HDKDRLMYEA VTYGNGAGSY PVQGNLTNAL NRMASLGAVS LLIPGPKMIW | 660 |
| HFQELGMDDS IYTCTNGTVN SETDTTTGDC KLSTKPQPQW VEDWLNDAIR GAIYTKYSKL | 720 |
| IQLKTTEPVF NGDYAISPDA NAIKPRIYIY DNSLPASSLK NVVVLANFSV ADQNVTPDFP | 780 |
| YTGTWYDLMD NTPITVSSTS AQILIPSGQF KIYGNQPATL TAETFDLENE FALYPNPAKE | 840 |
| SFSVSSSADS IEIFSITGQS ILKQSNIEAN QVIAVANLKS GVYLIKITKE NKSITKKLIK | 900 |
| N | 901 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.27 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM20(206-258)+GH13_10(346-504)+GH13_19(467-659)
| MFRNYICPYR SNFKRKCLAK CNRELGDNTA QPSLTLVSGN IYKLDLTSTI ENFYSVSSGT | 60 |
| ISKINIVLRS ADGTQQTADL EINVGSFQST LISPSENSTT ILNSGDNLSI SASNTNGNAD | 120 |
| YTLLANGVSL NTFTGSTYNY TDTNITTNKN YELQITQGGI TQSKYFSVVI NPGVLSENLP | 180 |
| ANTVIGINYD NSDTTKATLV LNAPGKEFIY VAGSFNNWQP SSAYAMKKDP SSDKFWIELV | 240 |
| GLTPGQVYTY QYWVFDTTPT TNSQILVKTA DPCSTLVLSP YDDPYIPSGS FPDLATTYAY | 300 |
| PAGQEREVTV LQTGQTPYNW QVTNFTKPSK DNLVVYEVLV RDFDADRNYQ DLIDKVNYFK | 360 |
| NLGVNAIELM PVMEFEGNES WGYNTSFHMA LDKYYGTSDK LKEFVDLCHQ NGIAVILDIA | 420 |
| FNHAFGRNPM VRMWMNDPDG DGWGGPNTDN PYFNTIAKHS YSVGEDFNHT SADTKEYVKR | 480 |
| TVQYWIEEFK IDGFRWDLTK GFTQACTASD ETCTNAYQQD RVDILKDYAD FSWSIDPDHY | 540 |
| VIFEHLGTDA EEQQWANYRL NEGKGIMMWG EMFYNYSQLA KGYATNADIT RMGHVSRGFS | 600 |
| GKRLMGYPES HDKDRLMYEA VTYGNGAGSY PVQGNLTNAL NRMASLGAVS LLIPGPKMIW | 660 |
| HFQELGMDDS IYTCTNGTVN SETDTTTGDC KLSTKPQPQW VEDWLNDAIR GAIYTKYSKL | 720 |
| IQLKTTEPVF NGDYAISPDA NAIKPRIYIY DNSLPASSLK NVVVLANFSV ADQNVTPDFP | 780 |
| YTGTWYDLMD NTPITVSSTS AQILIPSGQF KIYGNQPATL TAETFDLENE FALYPNPAKE | 840 |
| SFSVSSSADS IEIFSITGQS ILKQSNIEAN QVIAVANLKS GVYLIKITKE NKSITKKLIK | 900 |
| N | 901 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.