CAZyme3D

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Entry ID

Information for CAZyme ID: AWL35444.1

Basic Information

GenBank IDAWL35444.1
FamilyGH13_26
Sequence Length826
UniProt IDA0A2S2FWS1(100,100)Download
Average pLDDT?93.85
CAZy50 ID6899
CAZy50 RepNo, AJT63674.3
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID565560
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. SM17

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTPASPVPPA  PPTATYRIQL  HPGHPFAAAE  ADVPALAALG  VSHLHLSPVL  EAVPGSTHGY60
DVTDPTRVRA  ELGGEAGLRS  LSRTARAHGL  GLVVDIVPNH  MAADPVHNQA  LRTVLRDGPH120
SPYAAWFDID  WAGGGGQLLL  PVLGERAGEA  AAGMRVEDGE  LRLPGGLALP  LRAGTERLPL180
PELLDAQWYR  PVWWRLARTE  LNYRRFFTIN  DLIAVRVEDP  AVFEATHATV  LALLDEGVVH240
GLRVDHPDGL  TDPGAYLARL  RERSGGRWTV  VEKILADGEP  LPPAWPVAGT  TGYDALRHVD300
AVLTDPEGAR  TLVEQYRAFA  DPEPEEGGEW  HATARRAARQ  VAGHDLAAEV  ETLVRIATRV360
CASGLGLRDH  APWALRTAVR  ELLVRVPVYR  PYPEQSPAET  AAVLTERAAE  EARAAFDVPE420
EAHAVDVVRG  LAAGTLTGLS  DTAGADAFRA  RFAQVASALH  AKAVEDRAFY  RYVPLLSACE480
VGGDPGSPAL  APEAFHAFCA  RLQREWPETG  TVLSTHDTKR  SADARARIGV  LAEFPRLWGE540
FLTGAVRRAG  KDAAAAVGLP  FTWAAWQTAC  ALLPEDGTPP  SESAGSSADR  LSGALLKHAR600
EAGLHTTWTE  QDPAYEEAVE  RYVREGLTGT  AADQFPALAE  RLGPYVRARV  LAAALLHLTM660
PGVPDVYQGT  EHDLRTLMDP  DNRRPVPSPA  GALRTLGSGG  RPTGLDEEKL  ALTATALRLR720
RERPGLFGAA  SGYHPVTARG  PAAAHCLAFG  RGPGTNPPLL  TAVTRLPGAL  HQAGGWRGTT780
LPLPPGRYTD  LLAGADPRPT  ASYEGEADLA  ALFAHRPVAL  LRREEE826

Predicted 3D structure by AlphaFold2 with pLDDT = 93.85 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH13_26(33-302)

MTPASPVPPA  PPTATYRIQL  HPGHPFAAAE  ADVPALAALG  VSHLHLSPVL  EAVPGSTHGY60
DVTDPTRVRA  ELGGEAGLRS  LSRTARAHGL  GLVVDIVPNH  MAADPVHNQA  LRTVLRDGPH120
SPYAAWFDID  WAGGGGQLLL  PVLGERAGEA  AAGMRVEDGE  LRLPGGLALP  LRAGTERLPL180
PELLDAQWYR  PVWWRLARTE  LNYRRFFTIN  DLIAVRVEDP  AVFEATHATV  LALLDEGVVH240
GLRVDHPDGL  TDPGAYLARL  RERSGGRWTV  VEKILADGEP  LPPAWPVAGT  TGYDALRHVD300
AVLTDPEGAR  TLVEQYRAFA  DPEPEEGGEW  HATARRAARQ  VAGHDLAAEV  ETLVRIATRV360
CASGLGLRDH  APWALRTAVR  ELLVRVPVYR  PYPEQSPAET  AAVLTERAAE  EARAAFDVPE420
EAHAVDVVRG  LAAGTLTGLS  DTAGADAFRA  RFAQVASALH  AKAVEDRAFY  RYVPLLSACE480
VGGDPGSPAL  APEAFHAFCA  RLQREWPETG  TVLSTHDTKR  SADARARIGV  LAEFPRLWGE540
FLTGAVRRAG  KDAAAAVGLP  FTWAAWQTAC  ALLPEDGTPP  SESAGSSADR  LSGALLKHAR600
EAGLHTTWTE  QDPAYEEAVE  RYVREGLTGT  AADQFPALAE  RLGPYVRARV  LAAALLHLTM660
PGVPDVYQGT  EHDLRTLMDP  DNRRPVPSPA  GALRTLGSGG  RPTGLDEEKL  ALTATALRLR720
RERPGLFGAA  SGYHPVTARG  PAAAHCLAFG  RGPGTNPPLL  TAVTRLPGAL  HQAGGWRGTT780
LPLPPGRYTD  LLAGADPRPT  ASYEGEADLA  ALFAHRPVAL  LRREEE826

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help