CAZyme3D

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Entry ID

Information for CAZyme ID: AWL04851.1

Basic Information

GenBank IDAWL04851.1
FamilyGT20
Sequence Length750
UniProt IDA0A2S2DHN1(100,100)Download
Average pLDDT?85.53
CAZy50 ID27405
CAZy50 RepNo, AWI52656.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID945844
KingdomBacteria
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusMassilia
SpeciesMassilia oculi

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRFRSVQLSM  RFIVPLALVL  ALFGYFAIPW  MENLTVRWFV  RDLDTRSQLV  SSTLQQPLLN60
YLEDNDAPRI  NDAFSRAIQD  ERLYALAFCD  PGGTLRYKTD  TYPESLGCRQ  GAGGEDANPV120
VRLPQGPVHV  SSRELTQDGA  TAGRLILVQD  MSFIERRSED  TKKYILALFV  VLAGAISLIT180
VLIAHLSWHG  WLNGVREMLR  GELSPRRPGP  MPPEIAPLAS  ELRALLNEYN  RDLQGSGVES240
QTWGADTLKT  LLNQDLAGDE  ILVVSNREPY  IHVNTPNGVK  VQRPASGLVT  AVEAVMRACS300
GTWIAHGAGS  ADRDTVDAND  HVRVPPEDPS  YTLRRVWLSK  EEEQGYYYGF  ANEGLWPLCH360
IAHVRPVFRS  TDWAEYVRVN  QRFADAVIAE  ARSDNPVVLV  QDYHFALLPR  MVRAVLPKAT420
IITFWHIPWP  NPESFGICPW  REEILDGMLG  STILGFHTPF  HRKNFLDTVD  RYLETRIENE480
ASTVSYGNEL  TQVKPYPISI  AWPQPAPDEC  DVAACRAEIR  QALSLPADQL  LGIGVDRLDY540
TKGIVERFQA  VERMLELHPD  MVGKFTFVQI  AAPTRSSLDE  YQNFEARVRA  LAQRINQRFS600
SGSYLPIILK  TEHHEQAQLR  TYFRASEVCS  VTSLHDGMNL  VAKEFIASRD  DEQGVLILSQ660
FTGAARELHE  ALIVNPYHIE  EGAEALYRAL  RMPQDEQRER  MRTMRVRVRD  FNVYRWAGRM720
LQDAARLRQR  ERVRSRINSL  SQNRVRKGDA  750

Predicted 3D structure by AlphaFold2 with pLDDT = 85.53 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT20(259-725)

MRFRSVQLSM  RFIVPLALVL  ALFGYFAIPW  MENLTVRWFV  RDLDTRSQLV  SSTLQQPLLN60
YLEDNDAPRI  NDAFSRAIQD  ERLYALAFCD  PGGTLRYKTD  TYPESLGCRQ  GAGGEDANPV120
VRLPQGPVHV  SSRELTQDGA  TAGRLILVQD  MSFIERRSED  TKKYILALFV  VLAGAISLIT180
VLIAHLSWHG  WLNGVREMLR  GELSPRRPGP  MPPEIAPLAS  ELRALLNEYN  RDLQGSGVES240
QTWGADTLKT  LLNQDLAGDE  ILVVSNREPY  IHVNTPNGVK  VQRPASGLVT  AVEAVMRACS300
GTWIAHGAGS  ADRDTVDAND  HVRVPPEDPS  YTLRRVWLSK  EEEQGYYYGF  ANEGLWPLCH360
IAHVRPVFRS  TDWAEYVRVN  QRFADAVIAE  ARSDNPVVLV  QDYHFALLPR  MVRAVLPKAT420
IITFWHIPWP  NPESFGICPW  REEILDGMLG  STILGFHTPF  HRKNFLDTVD  RYLETRIENE480
ASTVSYGNEL  TQVKPYPISI  AWPQPAPDEC  DVAACRAEIR  QALSLPADQL  LGIGVDRLDY540
TKGIVERFQA  VERMLELHPD  MVGKFTFVQI  AAPTRSSLDE  YQNFEARVRA  LAQRINQRFS600
SGSYLPIILK  TEHHEQAQLR  TYFRASEVCS  VTSLHDGMNL  VAKEFIASRD  DEQGVLILSQ660
FTGAARELHE  ALIVNPYHIE  EGAEALYRAL  RMPQDEQRER  MRTMRVRVRD  FNVYRWAGRM720
LQDAARLRQR  ERVRSRINSL  SQNRVRKGDA  750

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help