CAZyme3D

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Entry ID

Information for CAZyme ID: AWK06527.1

Basic Information

GenBank IDAWK06527.1
FamilyGH51
Sequence Length852
UniProt IDA0A2S1YR11(100,100)Download
Average pLDDT?91.48
CAZy50 ID6877
CAZy50 RepNo, BBE18431.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2183896
KingdomBacteria
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium crocinum
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A2S1YR11.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKRFLLDNGL  KLILSFLIIF  GMSGFNIKTN  DKNPDKVYLF  AYSTVKNNGK  NGLHFAWSTD60
QKNWFAIGPE  FSFLKSDFGS  WGPTGKSMSE  AFLVKDNTGI  FHCFWSVRDN  VFAHSESKDL120
INWGRQNYIQ  GMKNFVGKSE  DKSVILNVQV  SQKEGQYLVH  FSESGKNYYT  ATKDFQNYTP180
AVIDASASAL  KLRSEIKIQG  EVLQGTIHEV  NWSLVDNMIK  NMESVKFRDK  QNNTSPKSDS240
LLFLGLKPVK  AEIKINGQES  KKISNMLTGV  FFEDINYAAD  GGLYGELIQN  RDFEYSLHDK300
KGRDEKWNAS  MAWSGNFKIE  KENPIHANNP  NYAVISKGSI  SNSGFDGIAL  KANEKYDFNV360
FAKGTKAVVS  LKSANGEILA  EAAFTPSNSW  KKFNLVLKPL  KTVNDAHLEI  STNGETAVDM420
VSLFPQQTFK  NRKNGLRADL  AETIADMHPK  FVRFPGGCVA  HGDGLHNIYK  WKNTIGPLES480
RIGMRNIWGY  HQSMGLGYFE  YFQFCEDLGA  APVPVLAAGV  PCQNSSDGGS  GQQFGIPMED540
MDEYVQDVLD  LIEYANGSVN  TVWGKKRAEA  GHPKPFNLKY  VGIGNEDLIS  DVFEERYRMI600
VKAVQQKYPE  IMIIGTVGPF  FEGTDYREGW  RIADDLKLPL  VDEHYYQSPG  WFINNQDFYD660
SYDRSKSKVY  LGEYASWGNK  FYNALAEALY  LTGIERNGDV  VSMASYAPLL  AREKHTQWNP720
DLIYFNGNEV  KPTVNYFVQK  LYGQNPGDIY  LERTIKASDN  AEVNKRIGVS  VVKESSSGDL780
IIKLVNVLPV  AVTPSIEIAN  LATTENASYT  VLAGNPEKTD  ARPITQNVTV  KEAFSKELPP840
YSFTVIRIKT  KK852

Predicted 3D structure by AlphaFold2 with pLDDT = 91.48 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH43_18(87-181)+CBM16(287-401)+GH51(414-741)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help