Information for CAZyme ID: AWI59530.1
Basic Information
| GenBank ID | AWI59530.1 |
| Family | GT51 |
| Sequence Length | 741 |
| UniProt ID | A0A2U8G8H7(100,100) |
| Average pLDDT? | 78.59 |
| CAZy50 ID | 16925 |
| CAZy50 Rep | No, BCP55952.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1128331 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Sinorhizobium |
| Species | Sinorhizobium fredii |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MASRKSGQRI EPSFGGDYDD DDGLRIDASD RVSGGGRKVK RTPPSGKGGR QTRGRRAGRA | 60 |
| GGSGGGLFGP VRRLAYWCVV LGIWGAIGVG GLVLYYGARM PSATSWSIPE RPPNVKILAV | 120 |
| NGDIVANRGA TGGEALALED MSPYIPQAVI AIEDRRFYSH FGVDPLGLAR AMLTNLTSGR | 180 |
| MVQGGSTLTQ QLAKNLFLSP ERTLERKVQE VLLAFWLEQK YTKDQILAMY LNRVFFGSNA | 240 |
| YGVEAASRRY FNKSARDVNL GEAAVLAGLL KAPSRLSPAR DPEAAEARAQ VVLGAMREEG | 300 |
| FISDAEIKTA MSQTPTRAKS FWSGAEHYVA DMVMDQLPGM IGEVSQDLIV DTTIDLSLEK | 360 |
| KAEEVLAASL DEEGGKLNAS QAALVSIDGT GAIRALVGGR DYAESQFDRA SKAKRQPGSA | 420 |
| FKPFVYAAAL EIGRTPMSVR NDAPVRIGNW TPENYDQKYR GEVTLTDALA NSLNTIAAQL | 480 |
| VMEVGPPNVV KLAHRLGIDS EMQANASIAL GTSEVSLVEL TSSYAPFMNG GFKATPHVIR | 540 |
| RISTADGTVL YENTYDNPPR VLDPAIVSEM NQMLVRVLTD GTGKKARLPG WEAAGKTGTT | 600 |
| QSFRDALFVG YTSNLTTGVW FGNDDGKSMK KVTGGGLPAK AWHDFMVAAH EGLSPSPLFG | 660 |
| TTGVQPVFDE GSPVAGGEAL PDGFGDPAAF PERPAAMDGA IAVDQSRPAG EPTGGPVPPA | 720 |
| GVGETTGATR RTTLFELLTG G | 741 |
Predicted 3D structure by AlphaFold2 with pLDDT = 78.59 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT51(132-296)
| MASRKSGQRI EPSFGGDYDD DDGLRIDASD RVSGGGRKVK RTPPSGKGGR QTRGRRAGRA | 60 |
| GGSGGGLFGP VRRLAYWCVV LGIWGAIGVG GLVLYYGARM PSATSWSIPE RPPNVKILAV | 120 |
| NGDIVANRGA TGGEALALED MSPYIPQAVI AIEDRRFYSH FGVDPLGLAR AMLTNLTSGR | 180 |
| MVQGGSTLTQ QLAKNLFLSP ERTLERKVQE VLLAFWLEQK YTKDQILAMY LNRVFFGSNA | 240 |
| YGVEAASRRY FNKSARDVNL GEAAVLAGLL KAPSRLSPAR DPEAAEARAQ VVLGAMREEG | 300 |
| FISDAEIKTA MSQTPTRAKS FWSGAEHYVA DMVMDQLPGM IGEVSQDLIV DTTIDLSLEK | 360 |
| KAEEVLAASL DEEGGKLNAS QAALVSIDGT GAIRALVGGR DYAESQFDRA SKAKRQPGSA | 420 |
| FKPFVYAAAL EIGRTPMSVR NDAPVRIGNW TPENYDQKYR GEVTLTDALA NSLNTIAAQL | 480 |
| VMEVGPPNVV KLAHRLGIDS EMQANASIAL GTSEVSLVEL TSSYAPFMNG GFKATPHVIR | 540 |
| RISTADGTVL YENTYDNPPR VLDPAIVSEM NQMLVRVLTD GTGKKARLPG WEAAGKTGTT | 600 |
| QSFRDALFVG YTSNLTTGVW FGNDDGKSMK KVTGGGLPAK AWHDFMVAAH EGLSPSPLFG | 660 |
| TTGVQPVFDE GSPVAGGEAL PDGFGDPAAF PERPAAMDGA IAVDQSRPAG EPTGGPVPPA | 720 |
| GVGETTGATR RTTLFELLTG G | 741 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.