CAZyme3D

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Entry ID

Information for CAZyme ID: AWG23282.1

Basic Information

GenBank IDAWG23282.1
FamilyCBM35, GH2
Sequence Length1012
UniProt IDA0A2S1LHL6(100,100)Download
Average pLDDT?93.22
CAZy50 ID12954
CAZy50 RepNo, BAX78826.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1355330
KingdomBacteria
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium faecale

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKKGIILIAS  CLFWIVGQTQ  KINFNDQWRF  IQKDIVGGEV  SSYNDQSWRK  LNLPHDWSIE60
GEYDEKNPMG  DKCGYLPAGI  GWYRKTISVP  KEWKGKQIEI  IFDGVFMNST  VYANGVKLGV120
RPFGWITFGY  DISEQVRTSN  TITFAVRVDN  DQQPSARWYT  GSGIYANTWI  DIRDNIHVVN180
DGVFVRTEGN  KIKIDTEIKN  STTKKAKVIL  KTTFLDANGK  SVQKIESKLK  LHSNGTQKVA240
QQTHIDNPSL  WSIETPTLYK  AVSEIYEGKK  LVDRFETRFG  IRDIKWIPET  GMWINGKNVK300
IQGVCNHQDA  GALGAAVPDK  ILRFRIQQLK  DMGVNTIRTA  HNPQTPQFYA  MCDEIGMMVM360
DEIFDGWEQK  ATHDYGEQAF  AKWWKKDLTD  WIRRDHNHPS  IVIYSVGNET  HGDVGKDLVA420
ECHVNDPTRP  VTSGHSGSEF  MDVFGVNGSS  EKMGWFDTLP  KDRVFIATEN  THTWQVRGYY480
RTKTWYRDGY  PNTKQQPYEI  PDLTEKEVFT  HDWIEEANRK  FRKQIFNSSY  DNATVRLTSR540
HNIAQIRDIP  NYAGSFRWTG  HDYFGEAGYV  HGGWPFKSFM  GGAIDMANFE  KDLFYLYQSQ600
WTTKPMVHIL  PHWTHPKMKL  GMEIPVWVYS  NCDTVELFFD  GVSLGKINPG  TEWDKMQCQW660
MVPYQPGALK  AVGYKNGRIV  SQETIRTADT  PSENRLSIDG  EPLSKSGNDI  VQVRITATDA720
KGEMYPYGEN  RTYFTVLGAG  KIRALDNGSP  VDVEKHFEAS  NRIAFYGLTR  AYVETTKETG780
AVTLVASAIL  GEKKLITSNL  VSIDTQVLAL  RGTTPKLAIA  TYYTTDGTTP  TVQSQKYSAP840
FAVTLGTTVK  ALVLIDGKPS  EILSERFAED  EGFVWNDNPT  NTKVIGDQAE  QAKFTGVSIV900
TKGADFNGTG  YLLFDKKQSG  AVEWCQENDG  GEAKAEIWIR  YSAKVEGKTA  SAIKLTVNGK960
VLNEKLELPN  TKNLGSDWNI  VKVKIKLGRG  ANNYKIEPAD  GSTFAIDEIV  IK1012

Predicted 3D structure by AlphaFold2 with pLDDT = 93.22 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH2(19-579)+CBM35(888-1009)

MKKGIILIAS  CLFWIVGQTQ  KINFNDQWRF  IQKDIVGGEV  SSYNDQSWRK  LNLPHDWSIE60
GEYDEKNPMG  DKCGYLPAGI  GWYRKTISVP  KEWKGKQIEI  IFDGVFMNST  VYANGVKLGV120
RPFGWITFGY  DISEQVRTSN  TITFAVRVDN  DQQPSARWYT  GSGIYANTWI  DIRDNIHVVN180
DGVFVRTEGN  KIKIDTEIKN  STTKKAKVIL  KTTFLDANGK  SVQKIESKLK  LHSNGTQKVA240
QQTHIDNPSL  WSIETPTLYK  AVSEIYEGKK  LVDRFETRFG  IRDIKWIPET  GMWINGKNVK300
IQGVCNHQDA  GALGAAVPDK  ILRFRIQQLK  DMGVNTIRTA  HNPQTPQFYA  MCDEIGMMVM360
DEIFDGWEQK  ATHDYGEQAF  AKWWKKDLTD  WIRRDHNHPS  IVIYSVGNET  HGDVGKDLVA420
ECHVNDPTRP  VTSGHSGSEF  MDVFGVNGSS  EKMGWFDTLP  KDRVFIATEN  THTWQVRGYY480
RTKTWYRDGY  PNTKQQPYEI  PDLTEKEVFT  HDWIEEANRK  FRKQIFNSSY  DNATVRLTSR540
HNIAQIRDIP  NYAGSFRWTG  HDYFGEAGYV  HGGWPFKSFM  GGAIDMANFE  KDLFYLYQSQ600
WTTKPMVHIL  PHWTHPKMKL  GMEIPVWVYS  NCDTVELFFD  GVSLGKINPG  TEWDKMQCQW660
MVPYQPGALK  AVGYKNGRIV  SQETIRTADT  PSENRLSIDG  EPLSKSGNDI  VQVRITATDA720
KGEMYPYGEN  RTYFTVLGAG  KIRALDNGSP  VDVEKHFEAS  NRIAFYGLTR  AYVETTKETG780
AVTLVASAIL  GEKKLITSNL  VSIDTQVLAL  RGTTPKLAIA  TYYTTDGTTP  TVQSQKYSAP840
FAVTLGTTVK  ALVLIDGKPS  EILSERFAED  EGFVWNDNPT  NTKVIGDQAE  QAKFTGVSIV900
TKGADFNGTG  YLLFDKKQSG  AVEWCQENDG  GEAKAEIWIR  YSAKVEGKTA  SAIKLTVNGK960
VLNEKLELPN  TKNLGSDWNI  VKVKIKLGRG  ANNYKIEPAD  GSTFAIDEIV  IK1012

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help