CAZyme3D

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Entry ID

Information for CAZyme ID: AWE54903.1

Basic Information

GenBank IDAWE54903.1
FamilyCBM48, GH13_11
Sequence Length713
UniProt IDA0A2S1IQK6(100,100)Download
Average pLDDT?92.86
CAZy50 ID4613
CAZy50 RepNo, BBJ40837.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1827580
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces nigra

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSTGVSAWSG  HPYPLGASHD  GQGTNFALFS  EVAERVELVL  VDDQDRHTAV  PLTEVDGFVW60
HGYVPGVGPG  QRYGYRVHGP  WDPGLGHRCN  ASKLLLDPYS  RAVDGQVDNH  ASLFERTAGG120
PSPADSAGHT  MLGVVTDPHF  DWGDDRPPRR  PYADTVIYEA  HVRGLTRTHP  DVPPELRGTY180
AGLAHPAVVD  HLTSLGVTAV  ELMPVHQYVQ  DGVLLDRGLS  NYWGYNTIGF  FAPHNAYAAR240
GTRGEQVSEF  KAMVKALHEA  GLEVILDVVY  NHTAEGNERG  PTLSFRGIDN  ASYYRLVDGD300
WAHYYDTTGT  GNSLLMRHPY  VLQLIMDSLR  YWVTEMHVDG  FRFDLAATLA  RQFHEVDRLS360
AFFDLIQQDP  VISRVKLIAE  PWDVGEGGYQ  VGNFPPLWSE  WNGKYRDAVR  DFWRGEPGTL420
GEFASRLTGS  SDLYAHSRRR  PRASVNFVTA  HDGFTLRDLV  SYNDKHNDAN  GEDNRDGESH480
NRSWNCGTEG  DTDDPAVLRL  RARQQRNFLA  TLLLSQGIPM  LCHGDELGRT  QRGNNNAYCQ540
DNEISWIDWR  LTDEQRALAD  FTRYVIGLRA  AHPVLRRRRF  FKGETATRPD  QPLPDLVWFS600
PDGREMDDDD  WQSPDARAVA  AFLNGDAIAE  PDWCGRPVVD  DSFLLLFNSY  WEPVEFQLPQ660
AGYGERWTTL  IDTAEPQGPP  DETEHKAGTA  LLVERRSLVL  LSRPSRVSAP  ADS713

Predicted 3D structure by AlphaFold2 with pLDDT = 92.86 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM48(14-102)+GH13_11(177-530)

MSTGVSAWSG  HPYPLGASHD  GQGTNFALFS  EVAERVELVL  VDDQDRHTAV  PLTEVDGFVW60
HGYVPGVGPG  QRYGYRVHGP  WDPGLGHRCN  ASKLLLDPYS  RAVDGQVDNH  ASLFERTAGG120
PSPADSAGHT  MLGVVTDPHF  DWGDDRPPRR  PYADTVIYEA  HVRGLTRTHP  DVPPELRGTY180
AGLAHPAVVD  HLTSLGVTAV  ELMPVHQYVQ  DGVLLDRGLS  NYWGYNTIGF  FAPHNAYAAR240
GTRGEQVSEF  KAMVKALHEA  GLEVILDVVY  NHTAEGNERG  PTLSFRGIDN  ASYYRLVDGD300
WAHYYDTTGT  GNSLLMRHPY  VLQLIMDSLR  YWVTEMHVDG  FRFDLAATLA  RQFHEVDRLS360
AFFDLIQQDP  VISRVKLIAE  PWDVGEGGYQ  VGNFPPLWSE  WNGKYRDAVR  DFWRGEPGTL420
GEFASRLTGS  SDLYAHSRRR  PRASVNFVTA  HDGFTLRDLV  SYNDKHNDAN  GEDNRDGESH480
NRSWNCGTEG  DTDDPAVLRL  RARQQRNFLA  TLLLSQGIPM  LCHGDELGRT  QRGNNNAYCQ540
DNEISWIDWR  LTDEQRALAD  FTRYVIGLRA  AHPVLRRRRF  FKGETATRPD  QPLPDLVWFS600
PDGREMDDDD  WQSPDARAVA  AFLNGDAIAE  PDWCGRPVVD  DSFLLLFNSY  WEPVEFQLPQ660
AGYGERWTTL  IDTAEPQGPP  DETEHKAGTA  LLVERRSLVL  LSRPSRVSAP  ADS713

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help