CAZyme3D

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Entry ID

Information for CAZyme ID: AWB45498.1

Basic Information

GenBank IDAWB45498.1
FamilyGH43_11
Sequence Length535
UniProt IDA0A2S0UCF2(100,100)Download
Average pLDDT?95.12
CAZy50 ID60566
CAZy50 RepNo, WBL46941.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1532905
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. CAA11

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MISERSENCV  IHNPVLRGFN  PDPCMIRVED  TYYIAVSSFE  WLPGVRIYKS  SNLLEWEHCT60
DILTDQVDLR  GNPKNCSIWA  PQLSYDDGYF  YLIYTDVKST  KRPFKDAHNY  LIRSSQIEGP120
WSKPIYLNSS  GFDPSLFHDT  DGRKWLLNQL  WDYRIEEGNK  SSGIVIQEYD  PKQQRLIGDP180
VKLFDCTPLK  KTEAPHIYKY  GGYYYLITAE  GGTGTGHAVT  VARSRELLGP  YEVDPLNPML240
TSRDDSALPL  QCAGHGSLVE  TADGEWYMAH  LCTRPLAGKY  AVLGRETALQ  QVYWDEEGWL300
RLVGGGNHPR  IEVPAPKGTV  IQQRQLESLS  FKDDFNGPQL  KSNWNTLRIL  ANESWCSLQK360
RAGFLRIYGG  ESLQSLFNQH  LLAIRQTDKS  FRAETLLEYD  PVTYLQMAGL  LLYLNEDNYL420
YAYISHDEAE  GRVLRLMRCA  VDEFTLLPDV  IKLEAQGAVS  LAVEVHGLKA  QFSFCTSETA480
AWEPLGGPEH  IGFLSGGFTG  NFVGIAAQDM  RQFKGSHADF  AFFHYEGLAD  EEVHS535

Predicted 3D structure by AlphaFold2 with pLDDT = 95.12 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH43_11(11-300)+CBM91(331-528)

MISERSENCV  IHNPVLRGFN  PDPCMIRVED  TYYIAVSSFE  WLPGVRIYKS  SNLLEWEHCT60
DILTDQVDLR  GNPKNCSIWA  PQLSYDDGYF  YLIYTDVKST  KRPFKDAHNY  LIRSSQIEGP120
WSKPIYLNSS  GFDPSLFHDT  DGRKWLLNQL  WDYRIEEGNK  SSGIVIQEYD  PKQQRLIGDP180
VKLFDCTPLK  KTEAPHIYKY  GGYYYLITAE  GGTGTGHAVT  VARSRELLGP  YEVDPLNPML240
TSRDDSALPL  QCAGHGSLVE  TADGEWYMAH  LCTRPLAGKY  AVLGRETALQ  QVYWDEEGWL300
RLVGGGNHPR  IEVPAPKGTV  IQQRQLESLS  FKDDFNGPQL  KSNWNTLRIL  ANESWCSLQK360
RAGFLRIYGG  ESLQSLFNQH  LLAIRQTDKS  FRAETLLEYD  PVTYLQMAGL  LLYLNEDNYL420
YAYISHDEAE  GRVLRLMRCA  VDEFTLLPDV  IKLEAQGAVS  LAVEVHGLKA  QFSFCTSETA480
AWEPLGGPEH  IGFLSGGFTG  NFVGIAAQDM  RQFKGSHADF  AFFHYEGLAD  EEVHS535

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help