Information for CAZyme ID: AVR45626.1
Basic Information
GenBank ID | AVR45626.1 |
Family | CE12 |
Sequence Length | 505 |
UniProt ID | A0A2R3Z5S4(100,100)![]() |
Average pLDDT? | 92.48 |
CAZy50 ID | 66246 |
CAZy50 Rep | No, AOZ98786.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2126553 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Flavobacteriia |
Order | Flavobacteriales |
Family | Flavobacteriaceae |
Genus | Christiangramia |
Species | Christiangramia fulva |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKNFKQLLII LISIFLVSCQ DSNSKEPTVY IVGDSTVKNG SGQGDGGLWG WGDFIGQYLD | 60 |
TTKVNVENHA LGGTSSRTFQ TKGLWKPVKD SLQEGDYVLI QFGHNDSGPL NDDFRARGTI | 120 |
KGTSDQSEEI DNMLTGEHET VHSYGWYIRK VIQDVKEKGA IPVVMSPIPR NDWNNGQVPR | 180 |
NKDSYGGWAR QVAEEENVTF IDLNERMAST MERKGEENVT GTYFYKRDHT HTSAKGAALA | 240 |
ASLIVEGLQD SNNSLKDYLL ENPDVQLPAK KDIYIIGDST VASNNETLVG WGVPIDKYFD | 300 |
TTRVNVYNKA RGGRSSRTYR GEGLWKAVED SLDKGDFVLI QFGHNDGGHI DTPKYRGSLK | 360 |
GMGDETQTVE FKSDSTEVVH TYGWYMKKYI EEAKAKGATP IVLSMIPRNI WHGNKVERND | 420 |
DSYAKWAKEA VQEAGGFFID LNDSIARKYE AMGKQEVKDF FPKDHTHTNM KGAELNAYIV | 480 |
AKSLDQLKGS GIRDYVFIPE EEKKK | 505 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.48 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CE12(28-248)+CE12(273-484)
MKNFKQLLII LISIFLVSCQ DSNSKEPTVY IVGDSTVKNG SGQGDGGLWG WGDFIGQYLD | 60 |
TTKVNVENHA LGGTSSRTFQ TKGLWKPVKD SLQEGDYVLI QFGHNDSGPL NDDFRARGTI | 120 |
KGTSDQSEEI DNMLTGEHET VHSYGWYIRK VIQDVKEKGA IPVVMSPIPR NDWNNGQVPR | 180 |
NKDSYGGWAR QVAEEENVTF IDLNERMAST MERKGEENVT GTYFYKRDHT HTSAKGAALA | 240 |
ASLIVEGLQD SNNSLKDYLL ENPDVQLPAK KDIYIIGDST VASNNETLVG WGVPIDKYFD | 300 |
TTRVNVYNKA RGGRSSRTYR GEGLWKAVED SLDKGDFVLI QFGHNDGGHI DTPKYRGSLK | 360 |
GMGDETQTVE FKSDSTEVVH TYGWYMKKYI EEAKAKGATP IVLSMIPRNI WHGNKVERND | 420 |
DSYAKWAKEA VQEAGGFFID LNDSIARKYE AMGKQEVKDF FPKDHTHTNM KGAELNAYIV | 480 |
AKSLDQLKGS GIRDYVFIPE EEKKK | 505 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.