CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: AVR45626.1

Basic Information

GenBank IDAVR45626.1
FamilyCE12
Sequence Length505
UniProt IDA0A2R3Z5S4(100,100)Download
Average pLDDT?92.48
CAZy50 ID66246
CAZy50 RepNo, AOZ98786.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2126553
KingdomBacteria
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusChristiangramia
SpeciesChristiangramia fulva

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKNFKQLLII  LISIFLVSCQ  DSNSKEPTVY  IVGDSTVKNG  SGQGDGGLWG  WGDFIGQYLD60
TTKVNVENHA  LGGTSSRTFQ  TKGLWKPVKD  SLQEGDYVLI  QFGHNDSGPL  NDDFRARGTI120
KGTSDQSEEI  DNMLTGEHET  VHSYGWYIRK  VIQDVKEKGA  IPVVMSPIPR  NDWNNGQVPR180
NKDSYGGWAR  QVAEEENVTF  IDLNERMAST  MERKGEENVT  GTYFYKRDHT  HTSAKGAALA240
ASLIVEGLQD  SNNSLKDYLL  ENPDVQLPAK  KDIYIIGDST  VASNNETLVG  WGVPIDKYFD300
TTRVNVYNKA  RGGRSSRTYR  GEGLWKAVED  SLDKGDFVLI  QFGHNDGGHI  DTPKYRGSLK360
GMGDETQTVE  FKSDSTEVVH  TYGWYMKKYI  EEAKAKGATP  IVLSMIPRNI  WHGNKVERND420
DSYAKWAKEA  VQEAGGFFID  LNDSIARKYE  AMGKQEVKDF  FPKDHTHTNM  KGAELNAYIV480
AKSLDQLKGS  GIRDYVFIPE  EEKKK505

Predicted 3D structure by AlphaFold2 with pLDDT = 92.48 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE12(28-248)+CE12(273-484)

MKNFKQLLII  LISIFLVSCQ  DSNSKEPTVY  IVGDSTVKNG  SGQGDGGLWG  WGDFIGQYLD60
TTKVNVENHA  LGGTSSRTFQ  TKGLWKPVKD  SLQEGDYVLI  QFGHNDSGPL  NDDFRARGTI120
KGTSDQSEEI  DNMLTGEHET  VHSYGWYIRK  VIQDVKEKGA  IPVVMSPIPR  NDWNNGQVPR180
NKDSYGGWAR  QVAEEENVTF  IDLNERMAST  MERKGEENVT  GTYFYKRDHT  HTSAKGAALA240
ASLIVEGLQD  SNNSLKDYLL  ENPDVQLPAK  KDIYIIGDST  VASNNETLVG  WGVPIDKYFD300
TTRVNVYNKA  RGGRSSRTYR  GEGLWKAVED  SLDKGDFVLI  QFGHNDGGHI  DTPKYRGSLK360
GMGDETQTVE  FKSDSTEVVH  TYGWYMKKYI  EEAKAKGATP  IVLSMIPRNI  WHGNKVERND420
DSYAKWAKEA  VQEAGGFFID  LNDSIARKYE  AMGKQEVKDF  FPKDHTHTNM  KGAELNAYIV480
AKSLDQLKGS  GIRDYVFIPE  EEKKK505

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help