Information for CAZyme ID: AVQ71176.1
Basic Information
GenBank ID | AVQ71176.1 |
Family | CBM48, GH13_11 |
Sequence Length | 788 |
UniProt ID | A0A2P1UE20(100,100)![]() |
Average pLDDT? | 92.19 |
CAZy50 ID | 26208 |
CAZy50 Rep | No, WAS86178.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1967666 |
Kingdom | Bacteria |
Phylum | Cyanobacteriota |
Class | Cyanophyceae |
Order | Chroococcales |
Family | Microcystaceae |
Genus | Microcystis |
Species | Microcystis sp. MC19 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MNYARLSLAW HPHSNNRGKF SSPKHWLLAA LLSLVLSFAI PSLIEPALAV GANNLGATFD | 60 |
ATQNNVTFRV YSNAATHLEV WLYDQNLGAA EKFKLPLTQD SSSKIWSVSV PVSTLKANGI | 120 |
TDTIYYGYRA WGPNWTYDPS WTQGSTVGFV RDVDGQGNRF NPNKLLLDPY AVEVSHDRLI | 180 |
PTATGQTNGG IYVSGPEYRA FDTGSQAPKG IVLPLAQADI GNKPTRPFKD EIIYEVHLRG | 240 |
LTENDPDIPE NLRGTYAGAA LKAKYLKDLG VTAVEFLPLQ SMQNDTNDVI ASTAGDNYWG | 300 |
YDPYNYFAAD RRYAADKTPG GPTQEFQQMT KAFHEQGLKV YVDVVYNHTG EEGVDSTGNI | 360 |
SPIFTMRGLD NPTYYELSND VRYYYSDNGV GPNLNTGNPV VRDLIIDSLA YWKDTLGVDG | 420 |
FRFDLAPVIG NDCQRGCFQF NKFNPENALN RMVKELPVRP ANGGNGADLI AEPWAVTNYQ | 480 |
MGNFPSGWAE WNDKFRDSFR KVQNRLGVEN VPPNELATRF AGSRDLFQDD GRKPWHSVNF | 540 |
IVAHDGFTLR DVYNCNQKTN SQLTWDQGPS DGGTDNNLSW DQGGDPSLQR QATRTALALE | 600 |
MLSAGVPMMT GGDEMYRTQY CNNNMYNVDS AANWLDYDNI KEYPHFFNYS QKLLAFRNAH | 660 |
PALRPADFFR GTDNNGNGLK DLTWLRSDGN EPDSNYFSDP NQHFLAYRLD GSELGDGGQS | 720 |
IYVAYNSWSG NIQATLPPNL PGKQWYRVAD TAGFMESQDN FNAPGAEELL TGSTYDVNGR | 780 |
SLVLLIEK | 788 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.19 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM48(54-174)+GH13_11(253-618)
MNYARLSLAW HPHSNNRGKF SSPKHWLLAA LLSLVLSFAI PSLIEPALAV GANNLGATFD | 60 |
ATQNNVTFRV YSNAATHLEV WLYDQNLGAA EKFKLPLTQD SSSKIWSVSV PVSTLKANGI | 120 |
TDTIYYGYRA WGPNWTYDPS WTQGSTVGFV RDVDGQGNRF NPNKLLLDPY AVEVSHDRLI | 180 |
PTATGQTNGG IYVSGPEYRA FDTGSQAPKG IVLPLAQADI GNKPTRPFKD EIIYEVHLRG | 240 |
LTENDPDIPE NLRGTYAGAA LKAKYLKDLG VTAVEFLPLQ SMQNDTNDVI ASTAGDNYWG | 300 |
YDPYNYFAAD RRYAADKTPG GPTQEFQQMT KAFHEQGLKV YVDVVYNHTG EEGVDSTGNI | 360 |
SPIFTMRGLD NPTYYELSND VRYYYSDNGV GPNLNTGNPV VRDLIIDSLA YWKDTLGVDG | 420 |
FRFDLAPVIG NDCQRGCFQF NKFNPENALN RMVKELPVRP ANGGNGADLI AEPWAVTNYQ | 480 |
MGNFPSGWAE WNDKFRDSFR KVQNRLGVEN VPPNELATRF AGSRDLFQDD GRKPWHSVNF | 540 |
IVAHDGFTLR DVYNCNQKTN SQLTWDQGPS DGGTDNNLSW DQGGDPSLQR QATRTALALE | 600 |
MLSAGVPMMT GGDEMYRTQY CNNNMYNVDS AANWLDYDNI KEYPHFFNYS QKLLAFRNAH | 660 |
PALRPADFFR GTDNNGNGLK DLTWLRSDGN EPDSNYFSDP NQHFLAYRLD GSELGDGGQS | 720 |
IYVAYNSWSG NIQATLPPNL PGKQWYRVAD TAGFMESQDN FNAPGAEELL TGSTYDVNGR | 780 |
SLVLLIEK | 788 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.