CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: AVQ71176.1

Basic Information

GenBank IDAVQ71176.1
FamilyCBM48, GH13_11
Sequence Length788
UniProt IDA0A2P1UE20(100,100)Download
Average pLDDT?92.19
CAZy50 ID26208
CAZy50 RepNo, WAS86178.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1967666
KingdomBacteria
PhylumCyanobacteriota
ClassCyanophyceae
OrderChroococcales
FamilyMicrocystaceae
GenusMicrocystis
SpeciesMicrocystis sp. MC19

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNYARLSLAW  HPHSNNRGKF  SSPKHWLLAA  LLSLVLSFAI  PSLIEPALAV  GANNLGATFD60
ATQNNVTFRV  YSNAATHLEV  WLYDQNLGAA  EKFKLPLTQD  SSSKIWSVSV  PVSTLKANGI120
TDTIYYGYRA  WGPNWTYDPS  WTQGSTVGFV  RDVDGQGNRF  NPNKLLLDPY  AVEVSHDRLI180
PTATGQTNGG  IYVSGPEYRA  FDTGSQAPKG  IVLPLAQADI  GNKPTRPFKD  EIIYEVHLRG240
LTENDPDIPE  NLRGTYAGAA  LKAKYLKDLG  VTAVEFLPLQ  SMQNDTNDVI  ASTAGDNYWG300
YDPYNYFAAD  RRYAADKTPG  GPTQEFQQMT  KAFHEQGLKV  YVDVVYNHTG  EEGVDSTGNI360
SPIFTMRGLD  NPTYYELSND  VRYYYSDNGV  GPNLNTGNPV  VRDLIIDSLA  YWKDTLGVDG420
FRFDLAPVIG  NDCQRGCFQF  NKFNPENALN  RMVKELPVRP  ANGGNGADLI  AEPWAVTNYQ480
MGNFPSGWAE  WNDKFRDSFR  KVQNRLGVEN  VPPNELATRF  AGSRDLFQDD  GRKPWHSVNF540
IVAHDGFTLR  DVYNCNQKTN  SQLTWDQGPS  DGGTDNNLSW  DQGGDPSLQR  QATRTALALE600
MLSAGVPMMT  GGDEMYRTQY  CNNNMYNVDS  AANWLDYDNI  KEYPHFFNYS  QKLLAFRNAH660
PALRPADFFR  GTDNNGNGLK  DLTWLRSDGN  EPDSNYFSDP  NQHFLAYRLD  GSELGDGGQS720
IYVAYNSWSG  NIQATLPPNL  PGKQWYRVAD  TAGFMESQDN  FNAPGAEELL  TGSTYDVNGR780
SLVLLIEK788

Predicted 3D structure by AlphaFold2 with pLDDT = 92.19 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM48(54-174)+GH13_11(253-618)

MNYARLSLAW  HPHSNNRGKF  SSPKHWLLAA  LLSLVLSFAI  PSLIEPALAV  GANNLGATFD60
ATQNNVTFRV  YSNAATHLEV  WLYDQNLGAA  EKFKLPLTQD  SSSKIWSVSV  PVSTLKANGI120
TDTIYYGYRA  WGPNWTYDPS  WTQGSTVGFV  RDVDGQGNRF  NPNKLLLDPY  AVEVSHDRLI180
PTATGQTNGG  IYVSGPEYRA  FDTGSQAPKG  IVLPLAQADI  GNKPTRPFKD  EIIYEVHLRG240
LTENDPDIPE  NLRGTYAGAA  LKAKYLKDLG  VTAVEFLPLQ  SMQNDTNDVI  ASTAGDNYWG300
YDPYNYFAAD  RRYAADKTPG  GPTQEFQQMT  KAFHEQGLKV  YVDVVYNHTG  EEGVDSTGNI360
SPIFTMRGLD  NPTYYELSND  VRYYYSDNGV  GPNLNTGNPV  VRDLIIDSLA  YWKDTLGVDG420
FRFDLAPVIG  NDCQRGCFQF  NKFNPENALN  RMVKELPVRP  ANGGNGADLI  AEPWAVTNYQ480
MGNFPSGWAE  WNDKFRDSFR  KVQNRLGVEN  VPPNELATRF  AGSRDLFQDD  GRKPWHSVNF540
IVAHDGFTLR  DVYNCNQKTN  SQLTWDQGPS  DGGTDNNLSW  DQGGDPSLQR  QATRTALALE600
MLSAGVPMMT  GGDEMYRTQY  CNNNMYNVDS  AANWLDYDNI  KEYPHFFNYS  QKLLAFRNAH660
PALRPADFFR  GTDNNGNGLK  DLTWLRSDGN  EPDSNYFSDP  NQHFLAYRLD  GSELGDGGQS720
IYVAYNSWSG  NIQATLPPNL  PGKQWYRVAD  TAGFMESQDN  FNAPGAEELL  TGSTYDVNGR780
SLVLLIEK788

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help