CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: AVM61218.1

Basic Information

GenBank IDAVM61218.1
FamilyGH32
Sequence Length509
UniProt IDA0A2S0LLZ0(100,100)Download
Average pLDDT?94.40
CAZy50 ID63965
CAZy50 RepNo, VEG26152.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2081702
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusActinomyces
SpeciesActinomyces sp. oral taxon 897

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTEDLSALAK  DAVAASRAAS  DPDYPVFHVA  PPVGRLNDPN  GLLVDGGTYH  VFYQFTPLHP60
HRKLVYWGHT  SSTDLARWEH  HAPAVVPDSP  YDANGAYSGN  AIVLEGAELP  AAPASAPYQL120
FFTGNLKDPV  TGERTASQNL  VTSRDLVTFT  KWEGNPLIPT  HAPGYTAHYR  DPQVFRDPDA180
PGQFRMLLGV  QRQDETGAAL  LYRSTDLLSW  DLEGELTFPD  AGGAFERFGY  MWECPGIVRL240
TDELTGEDWD  VLIWCPQGIS  PQAEGYENVF  ACTYTVGHLV  GTELRDCDGT  FHEVDRGFEF300
YAPQAFARRP  SEPGAVTLVG  WLGNAGEDDQ  PSVSTGGWVH  ALSVPRRLSL  RGGRLVQRPV360
LELGEGASTS  CLSGSVLTAG  ATPVPELSGS  RSWQLRVEGP  QAGGPAPTWG  VRIGTADCHV420
DVTIEDGSLV  VDRSTSRYTQ  HGARRVVTLP  PGADSVLEVL  HDRSVTEIVS  ADGETVFALR480
SFVTPGTSGV  SLLSSGGAQM  RVVSLQARD509

Predicted 3D structure by AlphaFold2 with pLDDT = 94.40 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH32(28-359)

MTEDLSALAK  DAVAASRAAS  DPDYPVFHVA  PPVGRLNDPN  GLLVDGGTYH  VFYQFTPLHP60
HRKLVYWGHT  SSTDLARWEH  HAPAVVPDSP  YDANGAYSGN  AIVLEGAELP  AAPASAPYQL120
FFTGNLKDPV  TGERTASQNL  VTSRDLVTFT  KWEGNPLIPT  HAPGYTAHYR  DPQVFRDPDA180
PGQFRMLLGV  QRQDETGAAL  LYRSTDLLSW  DLEGELTFPD  AGGAFERFGY  MWECPGIVRL240
TDELTGEDWD  VLIWCPQGIS  PQAEGYENVF  ACTYTVGHLV  GTELRDCDGT  FHEVDRGFEF300
YAPQAFARRP  SEPGAVTLVG  WLGNAGEDDQ  PSVSTGGWVH  ALSVPRRLSL  RGGRLVQRPV360
LELGEGASTS  CLSGSVLTAG  ATPVPELSGS  RSWQLRVEGP  QAGGPAPTWG  VRIGTADCHV420
DVTIEDGSLV  VDRSTSRYTQ  HGARRVVTLP  PGADSVLEVL  HDRSVTEIVS  ADGETVFALR480
SFVTPGTSGV  SLLSSGGAQM  RVVSLQARD509

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help