Information for CAZyme ID: AVM43814.1
Basic Information
| GenBank ID | AVM43814.1 |
| Family | GH0 |
| Sequence Length | 1061 |
| UniProt ID | A0A2S0KS33(100,100) |
| Average pLDDT? | 86.89 |
| CAZy50 ID | 6814 |
| CAZy50 Rep | No, AVM46236.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2094242 |
| Kingdom | Bacteria |
| Phylum | Lentisphaerota |
| Class | Lentisphaeria |
| Order | Victivallales |
| Family | |
| Genus | |
| Species | Victivallales bacterium CCUG 44730 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MYRLFVIIFT AAMTGLIFCL AAEELDTIGF EQGFQDIWVG RPEAVRIDAS DSSEGKQCAV | 60 |
| FDPGGRIAEI ARGIKLRRNE IYTVKFDARS TSPGGGAPEI QVRLLMRSLK KPIDWFKEAG | 120 |
| KASAELNVPT ALRGEWQTFS CSFGPLPDTW RDAEVSSVNL YFQILPGKKP GKVLLDNIRI | 180 |
| STRPAVETKP EISFLLPDPV RIFDRIPDFK VKRSGRAGVL RVTARNAGGE ETLKLQGVPG | 240 |
| EGSLAVTLPG PDYYDIAAEV VDGTKILASA RTSVVVTTPL PDDYYSTPHP AFGVWCQVDD | 300 |
| RMHRLGGGKW TRHTLFTYFP SANGGTPPSP EKVATRSPVK VITNVNIPHR PHSAEELAEQ | 360 |
| RRKLEREMIA RRGLVDIWET QNEPMLGENF HGTMQQAADI MAMQSSVARQ VVPGVPVAGI | 420 |
| CLNPMQKNHF LQYLNYYRNC GIDRQIDMLA LHPYIPGAQS PDTSGYVETI NRLRKEVSKI | 480 |
| AGREIPVFIS EIGYSTKPGG EVTELQQAAY LARVAMLNRQ IPGLVGCVWH NGVWTEAYSR | 540 |
| REYDFGIMKG VKGSSIREPK PAFAAWATVS RQTWNADYLR ELDFGRNVRV LLFRRNGKPL | 600 |
| LALWGLQGEP VSVRLPLNVP EVTVVELCGR SRRVRLADGV LPLSLGEAPV YVSGDFPAIF | 660 |
| DERSFAVAME PEVPAALAGM PFEFQVRLPG HFSSAELRIP AGEYGTAQVT GSGADRTVKI | 720 |
| IPAPGIRPGC YDLELRLEEN GRPRSILIRQ LEILRPVDFS RVAPVAVPQG RAILCTAEFR | 780 |
| DSTAGDATVE ILENGNRVIG LARLSAPGES VIPLYLTRIG RRNSYSARFT LSDGSSYVQP | 840 |
| LGGGLTPVSI PYFRDALDRV EEWPECGRFA IGDGVASSHG LTGENDRPSG VIRLAWDEDF | 900 |
| LYYAVDVNDK TCRTVALPAD MWQGDSLQCG IAADPQFMIR PNNDGLQETA YNEFGTDLRD | 960 |
| GGSRSWTWAS MNRNAMPCNR PVPGIRLDHR RDRTWTFYRA AVPWETLNIR PGEGVPLRLS | 1020 |
| ILVNDSDGGV RHWMEWFGGI ADGKDPGLYG SAVLTKQDRQ P | 1061 |
Predicted 3D structure by AlphaFold2 with pLDDT = 86.89 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM9(885-1052)
| MYRLFVIIFT AAMTGLIFCL AAEELDTIGF EQGFQDIWVG RPEAVRIDAS DSSEGKQCAV | 60 |
| FDPGGRIAEI ARGIKLRRNE IYTVKFDARS TSPGGGAPEI QVRLLMRSLK KPIDWFKEAG | 120 |
| KASAELNVPT ALRGEWQTFS CSFGPLPDTW RDAEVSSVNL YFQILPGKKP GKVLLDNIRI | 180 |
| STRPAVETKP EISFLLPDPV RIFDRIPDFK VKRSGRAGVL RVTARNAGGE ETLKLQGVPG | 240 |
| EGSLAVTLPG PDYYDIAAEV VDGTKILASA RTSVVVTTPL PDDYYSTPHP AFGVWCQVDD | 300 |
| RMHRLGGGKW TRHTLFTYFP SANGGTPPSP EKVATRSPVK VITNVNIPHR PHSAEELAEQ | 360 |
| RRKLEREMIA RRGLVDIWET QNEPMLGENF HGTMQQAADI MAMQSSVARQ VVPGVPVAGI | 420 |
| CLNPMQKNHF LQYLNYYRNC GIDRQIDMLA LHPYIPGAQS PDTSGYVETI NRLRKEVSKI | 480 |
| AGREIPVFIS EIGYSTKPGG EVTELQQAAY LARVAMLNRQ IPGLVGCVWH NGVWTEAYSR | 540 |
| REYDFGIMKG VKGSSIREPK PAFAAWATVS RQTWNADYLR ELDFGRNVRV LLFRRNGKPL | 600 |
| LALWGLQGEP VSVRLPLNVP EVTVVELCGR SRRVRLADGV LPLSLGEAPV YVSGDFPAIF | 660 |
| DERSFAVAME PEVPAALAGM PFEFQVRLPG HFSSAELRIP AGEYGTAQVT GSGADRTVKI | 720 |
| IPAPGIRPGC YDLELRLEEN GRPRSILIRQ LEILRPVDFS RVAPVAVPQG RAILCTAEFR | 780 |
| DSTAGDATVE ILENGNRVIG LARLSAPGES VIPLYLTRIG RRNSYSARFT LSDGSSYVQP | 840 |
| LGGGLTPVSI PYFRDALDRV EEWPECGRFA IGDGVASSHG LTGENDRPSG VIRLAWDEDF | 900 |
| LYYAVDVNDK TCRTVALPAD MWQGDSLQCG IAADPQFMIR PNNDGLQETA YNEFGTDLRD | 960 |
| GGSRSWTWAS MNRNAMPCNR PVPGIRLDHR RDRTWTFYRA AVPWETLNIR PGEGVPLRLS | 1020 |
| ILVNDSDGGV RHWMEWFGGI ADGKDPGLYG SAVLTKQDRQ P | 1061 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.