CAZyme3D

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Entry ID

Information for CAZyme ID: AUX12694.1

Basic Information

GenBank IDAUX12694.1
FamilyGH32
Sequence Length491
UniProt IDA0A2L0E5Y1(100,100)Download
Average pLDDT?96.73
CAZy50 ID69212
CAZy50 RepNo, AMV67950.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1599
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLatilactobacillus
SpeciesLatilactobacillus sakei

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPLITNWTRQ  IRYQPYSDWS  IDYQQQLLNR  VQNSPYRLNY  HIQPDTGLLN  DPNGFSYFNH60
QWHLFYQSYP  MGPVHGLKSW  HHLISDDLID  WRKATPLLPG  GNYDSHGAYS  GSALPINDRL120
FLFYTGNVRN  SDWERTPFQN  GAWLSQAGTI  SKISEPLIKQ  PRHYTDHFRD  PMIFKYQDQI180
MALIGAQDNN  KIGKIAVFKA  DHNNINNWRP  LGELTFTSEK  LGYMVECPNL  IFINHQPVLI240
FCPQGLTSEV  ISYQNIYPNM  YVVGHSFELN  TTTITQPSEL  TNLDDGFDCY  ATQAFNAPDG300
RALAVSWLGL  PEIEYPTDKD  GWAHCLSLVK  ELTLHDNQLY  QYPVEETKAL  RQTKQIVSLS360
KQSTIPTTNA  YELELEVPAN  TSQTLHVFSN  PSKSNSLVLT  IDTTNGKITM  DRSAAGVSFG420
QQYGQIRTTN  VQPHHPIHIN  LFADQSVVEL  YINHGAKVMS  SRLFPAENQN  TIWAEIPQKA480
QLWPLSKVNN  N491

Predicted 3D structure by AlphaFold2 with pLDDT = 96.73 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH32(41-343)

MPLITNWTRQ  IRYQPYSDWS  IDYQQQLLNR  VQNSPYRLNY  HIQPDTGLLN  DPNGFSYFNH60
QWHLFYQSYP  MGPVHGLKSW  HHLISDDLID  WRKATPLLPG  GNYDSHGAYS  GSALPINDRL120
FLFYTGNVRN  SDWERTPFQN  GAWLSQAGTI  SKISEPLIKQ  PRHYTDHFRD  PMIFKYQDQI180
MALIGAQDNN  KIGKIAVFKA  DHNNINNWRP  LGELTFTSEK  LGYMVECPNL  IFINHQPVLI240
FCPQGLTSEV  ISYQNIYPNM  YVVGHSFELN  TTTITQPSEL  TNLDDGFDCY  ATQAFNAPDG300
RALAVSWLGL  PEIEYPTDKD  GWAHCLSLVK  ELTLHDNQLY  QYPVEETKAL  RQTKQIVSLS360
KQSTIPTTNA  YELELEVPAN  TSQTLHVFSN  PSKSNSLVLT  IDTTNGKITM  DRSAAGVSFG420
QQYGQIRTTN  VQPHHPIHIN  LFADQSVVEL  YINHGAKVMS  SRLFPAENQN  TIWAEIPQKA480
QLWPLSKVNN  N491

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help