CAZyme3D

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Entry ID

Information for CAZyme ID: AUW87421.1

Basic Information

GenBank IDAUW87421.1
FamilyAA3_2
Sequence Length300
UniProt IDA0A2L0CLY5(100,100)Download
Average pLDDT?95.10
CAZy50 ID19626
CAZy50 RepNo, CAD7199965.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2055351
KingdomEukaryota
PhylumArthropoda
ClassInsecta
OrderColeoptera
FamilyLimnichidae
GenusCephalobyrrhus
SpeciesCephalobyrrhus sp. INB082

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

IRRGSRCSTS  KAFLRPVRAR  KNLHIALHAH  VTRLLINPTN  MKAYGVEFSR  GGRRQVVKAR60
KEVILSAGSL  NTPQILMLSG  IGPKDHLQKM  GIPVLRDLPV  GDNLQDHVGM  GGLTFLVDKP120
VAIVQDRFEA  FPMTMEYVVR  GKGPMTTLGG  VEGLAFVNTP  YGNRSYPDIQ  FHMAPASINS180
DAGKRVRKVL  GITDHLYNTV  YKPIANKDAW  TLMPLLLRPR  SRGWVRLRSK  NPYHYPLVNA240
NYFDDPRDIR  TLVEGAKIAI  EISESPAFAQ  FGSRLHTIPF  PNCKRFEFAS  DAYWECHIRT300
300

Predicted 3D structure by AlphaFold2 with pLDDT = 95.10 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : AA3_2(3-299)

IRRGSRCSTS  KAFLRPVRAR  KNLHIALHAH  VTRLLINPTN  MKAYGVEFSR  GGRRQVVKAR60
KEVILSAGSL  NTPQILMLSG  IGPKDHLQKM  GIPVLRDLPV  GDNLQDHVGM  GGLTFLVDKP120
VAIVQDRFEA  FPMTMEYVVR  GKGPMTTLGG  VEGLAFVNTP  YGNRSYPDIQ  FHMAPASINS180
DAGKRVRKVL  GITDHLYNTV  YKPIANKDAW  TLMPLLLRPR  SRGWVRLRSK  NPYHYPLVNA240
NYFDDPRDIR  TLVEGAKIAI  EISESPAFAQ  FGSRLHTIPF  PNCKRFEFAS  DAYWECHIRT300
300

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help