Information for CAZyme ID: AUS04909.1
Basic Information
| GenBank ID | AUS04909.1 |
| Family | PL6 |
| Sequence Length | 894 |
| UniProt ID | A0A2I7SG74(100,100) |
| Average pLDDT? | 87.14 |
| CAZy50 ID | 11307 |
| CAZy50 Rep | No, UMB61050.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2069432 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Tamlana |
| Species | Tamlana carrageenivorans |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MVTKITLTKR LCFKKSWSKF NLMLLGLLIT QFVAAQSPYT ITNPDQLEGL SLVAGDVVIL | 60 |
| ANGTYSTDER ITFSGTGTAN APIIFKAETP GGVVFTGGMA MNIVGDHLVV DGFHWKGGYG | 120 |
| ASNFIQFRSG SVYANHSTIQ NCVIDGLGIE PDDLIDAQDP ANPGFYTSVP KHRWVVLYGT | 180 |
| YNNVVNCTFL NKKSAGALVL AELEYNASPD GVQNTRCLEV GHTIKNNYFY NFEKIVDNWG | 240 |
| TKFDGSELSN AGDSETIRIG TSEFQNVNAN CVISGNYFYK ADGENEIITN KSNGNIYENN | 300 |
| TFRSCRGSLV MRHGSEATVQ ENFFMGENTE GTGAIRIVDS KHVITNNYIQ DCINTMAQAK | 360 |
| WNNGITFLGG NDSADVACGS TSVSNGYQKT TAINVSNNTI VNTNAPLFYN LDKGSTDPTG | 420 |
| TVSNNLIYFD SGNANITEVI SGDTSSSFTN LGTALTYSGN EFVGTTLGAS TSGFDENTGI | 480 |
| TATPSGEIFT FSGTTGKGAD MKGALPFSHS NVGNDGVGAC FVDYLGAAIS NPTCNEIIVT | 540 |
| PGEYLSVGTV STLAYTAGIY DVSVSANVSW EVTSINGTWI SNVSPSFSTG NETVSFTVSE | 600 |
| NSGTTSRSGS ITFTQTSGAD NKVVVLNITQ DAPDLTDLLN LINSGANGAP VTVDSYSRQQ | 660 |
| DQSHPNPKNN VATNSLDKDS GTSWVADDLQ TDGEYVIYDL GGAYTLDLIE IATDSKSNPY | 720 |
| AFQVWVSTTD TQAGSFTKIL PVSDNYFYTT ANSTDFTQFA LNQEKARYVK VVGFGRFKDT | 780 |
| TNGAEVRDSQ WMNIAEINFY GEATTLSTNE FDSNAISLYP IPVKEVLHIK TNDISVDAVH | 840 |
| IYSLEGRLVL TQNFTNATSG ISINTSRLPQ GTYIVRMTNQ AHGLNTSKMI VVAP | 894 |
Predicted 3D structure by AlphaFold2 with pLDDT = 87.14 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : PL6(39-443)+CBM32(661-797)
| MVTKITLTKR LCFKKSWSKF NLMLLGLLIT QFVAAQSPYT ITNPDQLEGL SLVAGDVVIL | 60 |
| ANGTYSTDER ITFSGTGTAN APIIFKAETP GGVVFTGGMA MNIVGDHLVV DGFHWKGGYG | 120 |
| ASNFIQFRSG SVYANHSTIQ NCVIDGLGIE PDDLIDAQDP ANPGFYTSVP KHRWVVLYGT | 180 |
| YNNVVNCTFL NKKSAGALVL AELEYNASPD GVQNTRCLEV GHTIKNNYFY NFEKIVDNWG | 240 |
| TKFDGSELSN AGDSETIRIG TSEFQNVNAN CVISGNYFYK ADGENEIITN KSNGNIYENN | 300 |
| TFRSCRGSLV MRHGSEATVQ ENFFMGENTE GTGAIRIVDS KHVITNNYIQ DCINTMAQAK | 360 |
| WNNGITFLGG NDSADVACGS TSVSNGYQKT TAINVSNNTI VNTNAPLFYN LDKGSTDPTG | 420 |
| TVSNNLIYFD SGNANITEVI SGDTSSSFTN LGTALTYSGN EFVGTTLGAS TSGFDENTGI | 480 |
| TATPSGEIFT FSGTTGKGAD MKGALPFSHS NVGNDGVGAC FVDYLGAAIS NPTCNEIIVT | 540 |
| PGEYLSVGTV STLAYTAGIY DVSVSANVSW EVTSINGTWI SNVSPSFSTG NETVSFTVSE | 600 |
| NSGTTSRSGS ITFTQTSGAD NKVVVLNITQ DAPDLTDLLN LINSGANGAP VTVDSYSRQQ | 660 |
| DQSHPNPKNN VATNSLDKDS GTSWVADDLQ TDGEYVIYDL GGAYTLDLIE IATDSKSNPY | 720 |
| AFQVWVSTTD TQAGSFTKIL PVSDNYFYTT ANSTDFTQFA LNQEKARYVK VVGFGRFKDT | 780 |
| TNGAEVRDSQ WMNIAEINFY GEATTLSTNE FDSNAISLYP IPVKEVLHIK TNDISVDAVH | 840 |
| IYSLEGRLVL TQNFTNATSG ISINTSRLPQ GTYIVRMTNQ AHGLNTSKMI VVAP | 894 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.