CAZyme3D

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Entry ID

Information for CAZyme ID: AUN87479.1

Basic Information

GenBank IDAUN87479.1
FamilyCBM18, GH19
Sequence Length272
UniProt IDA0A2I6RLH9(100,100)Download
Average pLDDT?88.09
CAZy50 ID66102
CAZy50 RepNo, WFQ81615.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID542725
KingdomEukaryota
PhylumStreptophyta
ClassMagnoliopsida
OrderEricales
FamilyTheaceae
GenusCamellia
SpeciesCamellia fraterna

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVSLNIKNSL  LTIILAGILA  SGILPEIVVG  QNCGCAAGLC  CSQYGYCGTG  NAYCGAGCKS60
GPCTGSNGAS  VSNILTQSFF  NGIINQASAG  CAGKSFFTRS  AFLNAIGSYP  SFGTTGTTDD120
SKREIAAFFA  HATHETGHFC  YIEEINGASR  NYCDDINTQY  PCAPNKNYYG  RGPLQLTWNY180
NYGPAGESIG  FDGLNNPETV  ATDSVVSFKT  ALWFWTNQVH  NVINQGSGAT  IRAINGQLEC240
DGANPNAVNA  RVKYYTDYCN  QLGVAPGDNL  QC272

Predicted 3D structure by AlphaFold2 with pLDDT = 88.09 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM18(31-63)+GH19(71-272)

MVSLNIKNSL  LTIILAGILA  SGILPEIVVG  QNCGCAAGLC  CSQYGYCGTG  NAYCGAGCKS60
GPCTGSNGAS  VSNILTQSFF  NGIINQASAG  CAGKSFFTRS  AFLNAIGSYP  SFGTTGTTDD120
SKREIAAFFA  HATHETGHFC  YIEEINGASR  NYCDDINTQY  PCAPNKNYYG  RGPLQLTWNY180
NYGPAGESIG  FDGLNNPETV  ATDSVVSFKT  ALWFWTNQVH  NVINQGSGAT  IRAINGQLEC240
DGANPNAVNA  RVKYYTDYCN  QLGVAPGDNL  QC272

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help