CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: AUD92785.1

Basic Information

GenBank IDAUD92785.1
FamilyCBM61, GH53
Sequence Length897
UniProt IDA0A2K9BIN7(100,100)Download
Average pLDDT?86.47
CAZy50 ID2424
CAZy50 RepNo, QOL32639.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1685
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium breve
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A2K9BIN7.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRRNTALTRI  MASSVAAIML  CAGGTFTANA  AEEEPVKAAV  SVKAIQGLSD  DFIGGMDVSS60
MLSLEESGVT  FKNANDEVED  LFTLLKESGV  NYVRLRVWND  PFTADGQGYG  GGNVNADRAL120
TMAKRATAAG  LKVLVDFHYS  DFWADPSKQQ  VPKAWKSFEG  DADKTADTIY  DYTKQTLTTF180
KQAGVDVGMV  QVGNETTAKI  AGISGWDGMS  KVFSAGSKAI  REVLPEAKVV  IHFTNPEKAG240
TYATYAKQLS  NHNVDYDVFA  SSYYPFWHGT  TENLTSVLKN  VASTYKKDVM  VAETSWAYTL300
DDGDDDSNTV  PSKVTANNLK  KYDISPQGQA  DEIRAVAEAV  NNIGDNDGDG  ENDGLGVFYW360
EPAWVPVGTG  GKDNAELVDT  WNKYGGGWAT  EAAGEYDPND  AGLYWGGSGV  DNQALFDFDG420
KALASLPTFK  YIHTGAVTDH  VFTKIDPVEI  TATDSDSIDA  IKAQLPSEVA  AHYQDGVDET480
ETVTWQSAAL  DWIRGAGTYT  ITGTTNAGHD  VTATITVTAT  PAKDYVTDGN  FENAENDKNW540
TITGTGASIT  EDSGNAADGK  RALKFWASDA  YSFSATQTIT  GLEPGEYVLT  AMSQGAAADN600
AAIADGVTLS  ATAGGKTTSD  ALELNGWVKF  DTATVPVTVG  ADGTATITIT  GNLPADAWGN660
VDKVSLVKKT  ETPVKPSTEN  LDKAVAEAGK  INRDECTNES  LAKLDQALAA  ADVLLAGSAY720
TEQDVNDVTK  LVSDAIAGLA  PKEVSSLTVT  PSKTTYRVGD  VIDADHDLKV  VGNYSAGMGN780
VTLSADQFTL  DYDFSAPADA  AKVTVTLKSN  PNVTETYTVA  VTSQAEGGSG  NGSDGAGNGG840
ATINPDTGES  DKTNGANGGK  ITGVLSNTGS  AVTAVGLAVV  VLGVAGGVSL  ALRRKRS897

Predicted 3D structure by AlphaFold2 with pLDDT = 86.47 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH53(53-429)+CBM61(524-666)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help