Information for CAZyme ID: AUD87916.1
Basic Information
| GenBank ID | AUD87916.1 |
| Family | CBM48, GH13_11 |
| Sequence Length | 815 |
| UniProt ID | A0A0L0LRU7(100,100) |
| Average pLDDT? | 88.99 |
| CAZy50 ID | 18212 |
| CAZy50 Rep | No, AXM91107.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1685 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium breve |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKNPSLHRYA TRPGLYFTDD GGADAIVRSE TADQLWFCVL EPLDQPSAFY ADAVRLFNEP | 60 |
| GLTFIDQAMK QRICTRRIPS LNLRETLFRM DGPNYGLWYV HVPQAWDGMQ YGYRVNGPWD | 120 |
| PDHGVSFNPY KLLLDPYAKG IEGSMELDPG AFSYECEIVN GKVKGSPFGP MSTIDSVGHV | 180 |
| PVSVAIDDRA TNKHDGEPSH PHVAWSKTVI YELHVKGFTA NAPWLPKELR GTYAGLAHPA | 240 |
| TLSYLQDLGV TSIELLPIQA KQSELFLQER GRVNYWGYST LGYFAPEASY ATKRSQEAGA | 300 |
| AAVRQEVIDM VRALHEAGFE VIMDVVYNHT CESGPEGPTV CWRGLDNLSY YRRTKDKMSR | 360 |
| LYDTTGCGNT LDFTNTHVTT FAVDSLRYWA KRIGIDGFRF DLAATLARLD DEFTRYHPFL | 420 |
| YALRSDMLLG NLKMIMEPWD CGPNGWRTGE FGIPFAEWND RFRDCTRKFW LTDVDRMRGG | 480 |
| EYGEMTMQEM ATRLCGSSDL FATDPGRGST ASVNYVACHD GFTTADLTMY KTKHNEANGE | 540 |
| NNRDGTNDNH SVNFGHEGPS GDQIIVQQRQ RATMNLLGTL LLSLGTPMLL AGDEFGNSQN | 600 |
| GNNNAYTQDN DTTWLDWDWL YSTEQTPELK QFNLTSRLIT LRKSRDLYNH EDFFTRLSEI | 660 |
| GLLKKSDRVH WYLPNGQMPN DADWTNPSVR PFAMQLLSPD EPSLLILING SDEVTRFHLP | 720 |
| KDIEWEMVWS SSEIVGEYPG LGTSIERVSE FDEESESKPA GRLRNHLHRI NMMYWQMKDD | 780 |
| ADDLQSADDG LSEDDPTLWT LPALSISAMK QMPTI | 815 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.99 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM48(88-140)+GH13_11(230-598)
| MKNPSLHRYA TRPGLYFTDD GGADAIVRSE TADQLWFCVL EPLDQPSAFY ADAVRLFNEP | 60 |
| GLTFIDQAMK QRICTRRIPS LNLRETLFRM DGPNYGLWYV HVPQAWDGMQ YGYRVNGPWD | 120 |
| PDHGVSFNPY KLLLDPYAKG IEGSMELDPG AFSYECEIVN GKVKGSPFGP MSTIDSVGHV | 180 |
| PVSVAIDDRA TNKHDGEPSH PHVAWSKTVI YELHVKGFTA NAPWLPKELR GTYAGLAHPA | 240 |
| TLSYLQDLGV TSIELLPIQA KQSELFLQER GRVNYWGYST LGYFAPEASY ATKRSQEAGA | 300 |
| AAVRQEVIDM VRALHEAGFE VIMDVVYNHT CESGPEGPTV CWRGLDNLSY YRRTKDKMSR | 360 |
| LYDTTGCGNT LDFTNTHVTT FAVDSLRYWA KRIGIDGFRF DLAATLARLD DEFTRYHPFL | 420 |
| YALRSDMLLG NLKMIMEPWD CGPNGWRTGE FGIPFAEWND RFRDCTRKFW LTDVDRMRGG | 480 |
| EYGEMTMQEM ATRLCGSSDL FATDPGRGST ASVNYVACHD GFTTADLTMY KTKHNEANGE | 540 |
| NNRDGTNDNH SVNFGHEGPS GDQIIVQQRQ RATMNLLGTL LLSLGTPMLL AGDEFGNSQN | 600 |
| GNNNAYTQDN DTTWLDWDWL YSTEQTPELK QFNLTSRLIT LRKSRDLYNH EDFFTRLSEI | 660 |
| GLLKKSDRVH WYLPNGQMPN DADWTNPSVR PFAMQLLSPD EPSLLILING SDEVTRFHLP | 720 |
| KDIEWEMVWS SSEIVGEYPG LGTSIERVSE FDEESESKPA GRLRNHLHRI NMMYWQMKDD | 780 |
| ADDLQSADDG LSEDDPTLWT LPALSISAMK QMPTI | 815 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.