CAZyme3D

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Entry ID

Information for CAZyme ID: AUC74206.1

Basic Information

GenBank IDAUC74206.1
FamilyPL7
Sequence Length300
UniProt IDA0A2K8WUE8(100,100)Download
Average pLDDT?88.60
CAZy50 ID76694
CAZy50 RepNo, UXX78269.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2058135
KingdomBacteria
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusOlleya
SpeciesOlleya sp. Bg11-27

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRIKLKLIVL  FVFVSVLNAN  CQSSQVSTKE  TEVKSKKKRK  KKKKIKLPEI  DLTHWKVTTP60
GGNGKKPQEV  SPPEIINYAT  NESLKPYMYN  DSTRGALVFY  AFPSKATTAN  TKYSRSELRE120
QMVSGENNVN  WTFKDGGYMK  GKLAIDDISK  DSEGKYHRVI  IMQIHGRLTN  EQRDLIGEKD180
NNAPPILKVY  WDKGKIRVKT  KVLKNLSSTP  EEMLHEEAWG  DDEGFNFEQE  VGFGKFTLEV240
EVSDGKMVVI  LNKNEFKVYE  NIHMKKWGVF  ENYFKAGNYF  QTRDEGAFAK  VRFYDLEVTH300
300

Predicted 3D structure by AlphaFold2 with pLDDT = 88.60 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : PL7(50-300)

MRIKLKLIVL  FVFVSVLNAN  CQSSQVSTKE  TEVKSKKKRK  KKKKIKLPEI  DLTHWKVTTP60
GGNGKKPQEV  SPPEIINYAT  NESLKPYMYN  DSTRGALVFY  AFPSKATTAN  TKYSRSELRE120
QMVSGENNVN  WTFKDGGYMK  GKLAIDDISK  DSEGKYHRVI  IMQIHGRLTN  EQRDLIGEKD180
NNAPPILKVY  WDKGKIRVKT  KVLKNLSSTP  EEMLHEEAWG  DDEGFNFEQE  VGFGKFTLEV240
EVSDGKMVVI  LNKNEFKVYE  NIHMKKWGVF  ENYFKAGNYF  QTRDEGAFAK  VRFYDLEVTH300
300

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help