Information for CAZyme ID: AUC15104.1
Basic Information
| GenBank ID | AUC15104.1 |
| Family | CBM26, GH13_6 |
| Sequence Length | 864 |
| UniProt ID | A0A2K8VBV8(100,100) |
| Average pLDDT? | 82.89 |
| CAZy50 ID | 21250 |
| CAZy50 Rep | No, SNR16057.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 754423 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Tenacibaculum |
| Species | Tenacibaculum sp. SZ-18 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKKNLKNFQF ILLFIFSLNV LAQDEDVLFQ AFDWNVQNQP AGQTWFNVVT QNSNELSNAG | 60 |
| FDMIWLPPVS DSGAPQGYLP RELYNFDSAY GTEVQLRNLI NTYHSAGVKV IGDIVINHRV | 120 |
| GTADAVTFTN PAWPTTFITA DDEGRNFVNF PVQFSINNDY FPGTALKADG SNGTYGPARD | 180 |
| LDHYNPAVRQ EIKNWMNFLK NDLGFDGWRY DFVHGYDPIF NKEYNDATNP YFAVGELLES | 240 |
| SRVQTNNWVN FTQQSSSAFD FNTKVTLQNA FRDNNLSYLR DGGGNPSGMI GINPAKSVTF | 300 |
| LDNHDTGAAQ QCCGPGYVFP GGETNLRKGY AYILTHPGNP MVFWTHYFDT GIGVRNAIKD | 360 |
| LIAIRKDTRI FAGSSINIVE ARNDLYAAYI DGRNGTIAMK LGSGNWAPNG TGWILRTSGT | 420 |
| DYAVWTQGGT PPPPPTQVDP FTVNFKKPNS WNNNVNVYLF DASSNAIIPG TAAWPGQSMT | 480 |
| NIAGTPWYSF QVSPPQGVAA ENIRVIFNDG SNQTDDLSRS TDGWYDNGTW TNNCPLDCTS | 540 |
| TPPPPPTGNV TYQFKKPSNW SSNINVYFFD ASSNSTISGT QGWPGQTMSN ISGTPWYAYT | 600 |
| LNVPSGTSPD NIRVIFNDGS NQTDDLARGT DGWYDKGTWT SNCSSDCTNT PPPPTNTVTI | 660 |
| NFLRTSSWGN TVNAYLFNRA SNTTLSGTPG WPGQQMNNET NWSNYTFTVP SGVSSNNIGV | 720 |
| VFNNGNGQQT VDLTRGTDGW FRITGTSNGK STGVWTDNCS TNCTSSRSSA NSKTELSILD | 780 |
| NVSIAPNPIR NKSNLYISTS RNGTLKVSIS NILGQTKVIF NSEKQKGNHR IELSNSDFGA | 840 |
| KGIYIINTTL NDAPISKPIK IIKQ | 864 |
Predicted 3D structure by AlphaFold2 with pLDDT = 82.89 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH13_6(55-343)+CBM26(442-517)+CBM26(553-625)+CBM26(659-732)
| MKKNLKNFQF ILLFIFSLNV LAQDEDVLFQ AFDWNVQNQP AGQTWFNVVT QNSNELSNAG | 60 |
| FDMIWLPPVS DSGAPQGYLP RELYNFDSAY GTEVQLRNLI NTYHSAGVKV IGDIVINHRV | 120 |
| GTADAVTFTN PAWPTTFITA DDEGRNFVNF PVQFSINNDY FPGTALKADG SNGTYGPARD | 180 |
| LDHYNPAVRQ EIKNWMNFLK NDLGFDGWRY DFVHGYDPIF NKEYNDATNP YFAVGELLES | 240 |
| SRVQTNNWVN FTQQSSSAFD FNTKVTLQNA FRDNNLSYLR DGGGNPSGMI GINPAKSVTF | 300 |
| LDNHDTGAAQ QCCGPGYVFP GGETNLRKGY AYILTHPGNP MVFWTHYFDT GIGVRNAIKD | 360 |
| LIAIRKDTRI FAGSSINIVE ARNDLYAAYI DGRNGTIAMK LGSGNWAPNG TGWILRTSGT | 420 |
| DYAVWTQGGT PPPPPTQVDP FTVNFKKPNS WNNNVNVYLF DASSNAIIPG TAAWPGQSMT | 480 |
| NIAGTPWYSF QVSPPQGVAA ENIRVIFNDG SNQTDDLSRS TDGWYDNGTW TNNCPLDCTS | 540 |
| TPPPPPTGNV TYQFKKPSNW SSNINVYFFD ASSNSTISGT QGWPGQTMSN ISGTPWYAYT | 600 |
| LNVPSGTSPD NIRVIFNDGS NQTDDLARGT DGWYDKGTWT SNCSSDCTNT PPPPTNTVTI | 660 |
| NFLRTSSWGN TVNAYLFNRA SNTTLSGTPG WPGQQMNNET NWSNYTFTVP SGVSSNNIGV | 720 |
| VFNNGNGQQT VDLTRGTDGW FRITGTSNGK STGVWTDNCS TNCTSSRSSA NSKTELSILD | 780 |
| NVSIAPNPIR NKSNLYISTS RNGTLKVSIS NILGQTKVIF NSEKQKGNHR IELSNSDFGA | 840 |
| KGIYIINTTL NDAPISKPIK IIKQ | 864 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.