CAZyme3D

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Entry ID

Information for CAZyme ID: ATQ72008.1

Basic Information

GenBank IDATQ72008.1
FamilyGH171
Sequence Length413
UniProt IDA0A2D2DAG9(100,100)Download
Average pLDDT?91.23
CAZy50 ID87745
CAZy50 RepNo, AAP98733.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID83554
KingdomBacteria
PhylumChlamydiota
ClassChlamydiia
OrderChlamydiales
FamilyChlamydiaceae
GenusChlamydia
SpeciesChlamydia psittaci

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRLIRSFLIL  LCLFPCLGFP  QVSVGLDRIF  NDEPYLSWIR  DKKITLISHN  AAINHEGKDS60
LSAFLEHRDL  CSLNVLCTLE  HGYYGTAPAE  TPGTAPKVQG  LHIVSLYGVK  EVPEHAVQGS120
DVLIYDVQDI  GVRSYTFITS  LLHLVRAAQK  YKKHLIILDR  PNPMGGKIID  GPMPISQSEY180
APEIPYCYGM  TPGELALFYK  AKYAPYADVS  VVPMQGWKRS  MTFSQTGLNW  IPTSPQIPDA240
QTAFFYAATG  IIGALSISSI  GIGYTLPFRL  IGAPWMDGNL  VAKKLNEARL  PGITFYPFCY300
EPFFGKYKME  LCSGVLLVLD  KPREFLPMET  QSTILGTLKT  LYPKQVENAF  NALEKIPLRK360
NSIYRCLGEE  TFLHICQKER  YIIWPLKKLC  TEGRTKFQST  RKPFLIADYG  EEE413

Predicted 3D structure by AlphaFold2 with pLDDT = 91.23 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH171(44-406)

MRLIRSFLIL  LCLFPCLGFP  QVSVGLDRIF  NDEPYLSWIR  DKKITLISHN  AAINHEGKDS60
LSAFLEHRDL  CSLNVLCTLE  HGYYGTAPAE  TPGTAPKVQG  LHIVSLYGVK  EVPEHAVQGS120
DVLIYDVQDI  GVRSYTFITS  LLHLVRAAQK  YKKHLIILDR  PNPMGGKIID  GPMPISQSEY180
APEIPYCYGM  TPGELALFYK  AKYAPYADVS  VVPMQGWKRS  MTFSQTGLNW  IPTSPQIPDA240
QTAFFYAATG  IIGALSISSI  GIGYTLPFRL  IGAPWMDGNL  VAKKLNEARL  PGITFYPFCY300
EPFFGKYKME  LCSGVLLVLD  KPREFLPMET  QSTILGTLKT  LYPKQVENAF  NALEKIPLRK360
NSIYRCLGEE  TFLHICQKER  YIIWPLKKLC  TEGRTKFQST  RKPFLIADYG  EEE413

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help