CAZyme3D

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Entry ID

Information for CAZyme ID: ATP42422.1

Basic Information

GenBank IDATP42422.1
FamilyCE4
Sequence Length221
UniProt IDA0A2D1SZ73(100,100)Download
Average pLDDT?95.46
CAZy50 ID151614
CAZy50 RepNo, QAV20984.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2048654
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPlanococcaceae
GenusSolibacillus
SpeciesSolibacillus sp. R5-41

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAADKGRPYY  ENAGQIVWDI  KTDEKIIALT  FDDGPHKKYT  NEVLDLLAKY  EAKGTFFVVG60
EYAEKNPEVI  LRMHEEGHEL  ANHTYSHPFK  ASVPKLVKEI  QQTNEVIFSI  TGYAPKLFRP120
VEGQYTDALI  EAVVKDGYKV  VMWSWHLDTE  DWKDPGVKKI  VDIVLKGTRK  GNVVLFHDGG180
GNRKQTVEAL  SQILPTLQKE  GYQFVTISNL  LKVQRENVEK  P221

Predicted 3D structure by AlphaFold2 with pLDDT = 95.46 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE4(21-142)

MAADKGRPYY  ENAGQIVWDI  KTDEKIIALT  FDDGPHKKYT  NEVLDLLAKY  EAKGTFFVVG60
EYAEKNPEVI  LRMHEEGHEL  ANHTYSHPFK  ASVPKLVKEI  QQTNEVIFSI  TGYAPKLFRP120
VEGQYTDALI  EAVVKDGYKV  VMWSWHLDTE  DWKDPGVKKI  VDIVLKGTRK  GNVVLFHDGG180
GNRKQTVEAL  SQILPTLQKE  GYQFVTISNL  LKVQRENVEK  P221

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help