CAZyme3D

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Entry ID

Information for CAZyme ID: ATO14757.1

Basic Information

GenBank IDATO14757.1
FamilyCBM2, GH12
Sequence Length380
UniProt IDA0A2D1IAX5(100,100)Download
Average pLDDT?85.30
CAZy50 ID96946
CAZy50 RepNo, UWE08726.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2039870
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusMicromonospora
SpeciesMicromonospora sp. WMMA2032

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKRPLRAIAA  AGLLAASAVV  AIALGGNASA  DTQICEQYGS  TTIGGKYVVQ  NNRWGTSAQQ60
CINVTSTGFS  ITRADGSAPT  NGAPVSYPSV  FVGCHYTNCS  PGTNLPVQVK  NISSAPASIS120
YNYVSGAIYD  AAYDIWLDPS  PKRDGVNQME  IMIWLNRQGP  IQPIGSPVGN  ASIAGRTWEV180
WRGSNGSNNV  ISYVAPSAVP  SFSFDAMAFI  NDTRNRGAIT  NDWYLTSIQA  GFEPWQGGVG240
LAVNSFSQSV  NTGSNPPPTT  TPPTGTPTTN  PPSGTACTVT  YRATNVWNNG  FTAEVTIKNT300
GSGTINGWTL  NYNLPSGQNV  TSAWNATVSQ  SGSAVTARNV  SYNGTLSPGA  STNFGYQATL360
NGSFSAPSSF  SLNGATCARG  380

Predicted 3D structure by AlphaFold2 with pLDDT = 85.30 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH12(105-250)+CBM2(277-377)

MKRPLRAIAA  AGLLAASAVV  AIALGGNASA  DTQICEQYGS  TTIGGKYVVQ  NNRWGTSAQQ60
CINVTSTGFS  ITRADGSAPT  NGAPVSYPSV  FVGCHYTNCS  PGTNLPVQVK  NISSAPASIS120
YNYVSGAIYD  AAYDIWLDPS  PKRDGVNQME  IMIWLNRQGP  IQPIGSPVGN  ASIAGRTWEV180
WRGSNGSNNV  ISYVAPSAVP  SFSFDAMAFI  NDTRNRGAIT  NDWYLTSIQA  GFEPWQGGVG240
LAVNSFSQSV  NTGSNPPPTT  TPPTGTPTTN  PPSGTACTVT  YRATNVWNNG  FTAEVTIKNT300
GSGTINGWTL  NYNLPSGQNV  TSAWNATVSQ  SGSAVTARNV  SYNGTLSPGA  STNFGYQATL360
NGSFSAPSSF  SLNGATCARG  380

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help