Information for CAZyme ID: ATE54282.1
Basic Information
GenBank ID | ATE54282.1 |
Family | CBM2, CBM46, GH5_4 |
Sequence Length | 689 |
UniProt ID | A0A290Z5M2(100,100)![]() |
Average pLDDT? | 91.05 |
CAZy50 ID | 36076 |
CAZy50 Rep | No, UZN03284.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 42197 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Pseudonocardiales |
Family | Pseudonocardiaceae |
Genus | Actinosynnema |
Species | Actinosynnema pretiosum |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MLTAVATLVG ASFSAPRPAS AEATATADAA GCKVDYTVTS QWQNGFSGDV RITNLGDAVN | 60 |
GWTLTWAFPN GQAVSQAWNA NVTSSGATAT ATNVSYNAAI PTNGSVQFGF TGSWSGTNGV | 120 |
PTSFTLNGTA CTGGVAPTTT TTPVTTTTPV TTTTPNQPPG DAMATVAAMQ PGWNLGNSLD | 180 |
ATGADETSWG NPRITEALLD NVRSQGFNSI RIPVTWGQHQ GSGPSYTIEP AYLSRVKEVV | 240 |
GWALADGFYV LLNVHHDSWQ WINTMPSDRT NVLARYNATW TQLASAFKDS SSKLLLESVN | 300 |
EPQFTGSSGD AQNAQLLGEL NTSFHRIVRA SGGGNATRLL VLPTLHTSAD QARIDELNTT | 360 |
LTALNDRNIA ATVHYYGYWP FSVNVAGGTR FDATAQKDLT DYLDRAYNSF VARGIPVILG | 420 |
EYGLLGFDRH TGTIEQGEKL KFFELFGHYA KQRKITTMLW DNGQHLGRTS FQWSDPELIA | 480 |
QIKSSWTTRS GTASTDQVFS AKASAITAKT IALNLNGTTF SGLRNGSAEL VRGTDYTVSG | 540 |
DQLTLSAALI TRLSGARAYG VNATLSARFS AGVPWRIDLI TYDTPVLQNA TGATSAFSIP | 600 |
TNFRGDRLAT MEAKYADGSN AGPQNWTSFK EYDHTFAPDY AAGATLLKPE LFAEVNAGQR | 660 |
VTLTFHYWSG ATLTYYVTKN GTSVTGTTS | 689 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.05 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM2(32-131)+GH5_4(186-464)+CBM46(493-578)+CBM46(641-677)
MLTAVATLVG ASFSAPRPAS AEATATADAA GCKVDYTVTS QWQNGFSGDV RITNLGDAVN | 60 |
GWTLTWAFPN GQAVSQAWNA NVTSSGATAT ATNVSYNAAI PTNGSVQFGF TGSWSGTNGV | 120 |
PTSFTLNGTA CTGGVAPTTT TTPVTTTTPV TTTTPNQPPG DAMATVAAMQ PGWNLGNSLD | 180 |
ATGADETSWG NPRITEALLD NVRSQGFNSI RIPVTWGQHQ GSGPSYTIEP AYLSRVKEVV | 240 |
GWALADGFYV LLNVHHDSWQ WINTMPSDRT NVLARYNATW TQLASAFKDS SSKLLLESVN | 300 |
EPQFTGSSGD AQNAQLLGEL NTSFHRIVRA SGGGNATRLL VLPTLHTSAD QARIDELNTT | 360 |
LTALNDRNIA ATVHYYGYWP FSVNVAGGTR FDATAQKDLT DYLDRAYNSF VARGIPVILG | 420 |
EYGLLGFDRH TGTIEQGEKL KFFELFGHYA KQRKITTMLW DNGQHLGRTS FQWSDPELIA | 480 |
QIKSSWTTRS GTASTDQVFS AKASAITAKT IALNLNGTTF SGLRNGSAEL VRGTDYTVSG | 540 |
DQLTLSAALI TRLSGARAYG VNATLSARFS AGVPWRIDLI TYDTPVLQNA TGATSAFSIP | 600 |
TNFRGDRLAT MEAKYADGSN AGPQNWTSFK EYDHTFAPDY AAGATLLKPE LFAEVNAGQR | 660 |
VTLTFHYWSG ATLTYYVTKN GTSVTGTTS | 689 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.