Information for CAZyme ID: ATD37941.1
Basic Information
| GenBank ID | ATD37941.1 |
| Family | CBM48, GH13_11 |
| Sequence Length | 713 |
| UniProt ID | A0A807Z811(100,100) |
| Average pLDDT? | 92.74 |
| CAZy50 ID | 36422 |
| CAZy50 Rep | No, QHC09511.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 197700 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Aeromonadales |
| Family | Aeromonadaceae |
| Genus | Aeromonas |
| Species | Aeromonas salmonicida |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MFAMEKGQDH PLGGLLDETG CHFCVWAPQS DMVELCLFDE QEQELVRLAL PGRRGQYRFG | 60 |
| YVRGVKAGQR YGYRVHGAPQ EGMLFDPQKL LIDPYARGLS RATHWDDKLY EGDSAAMVAK | 120 |
| SVVVDDAFDW QGVGKPGIEP ARTVIYETHV KGFTRQHQGV PSELRGTYLG ICHPVIIEHL | 180 |
| KSLGVTSVQL MPVAAFMSEP RLEQLGLTNY WGYNPIAFFA PEPRYSAGEA VTEFKTMVRE | 240 |
| LHRAGLEVIL DVVYNHTAES GFDGPTLSFK GFDNAGYYAF EAGAHGPDYS RHANVTGCGN | 300 |
| SVNLDHPNSL RLVLDALRYW VTEMQVDGFR FDLAVTLARE AGEFDPMGAF FKAMMADPVL | 360 |
| ARVKLIAEPW DIGPFGYRLG QFPSQWLEIN DRYRDTVRAF WRGDAGKMGD FATRLVGSRD | 420 |
| LFPKNWRAPH TSVNYLCYHD GFTLEDLVSY NQRHNQANGE DNRDGHGNNL SNNHGVEGPT | 480 |
| LDPRVNNLRQ QQKRNLIATL LLSQGTPHFL AGDEMGRSQL GNNNAYCQDN QISWVNWQWR | 540 |
| PEDERLLAFT QQMMALRAES SVFANLQLSD DSWNGAPTSC HQVNWYHPDG HQLTDQDWHA | 600 |
| PMGQAFAMDI GMQQCEGERW YVLFNASDYD IQFRLPPPGE GLEWIQTIDT ATNDGLPFLP | 660 |
| DDIKRQVAVG RAHSLKLLER VSLPAVALAK EEVAITPDVA TVLPTGSQFP LAG | 713 |
Predicted 3D structure by AlphaFold2 with pLDDT = 92.74 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM48(11-99)+GH13_11(165-518)
| MFAMEKGQDH PLGGLLDETG CHFCVWAPQS DMVELCLFDE QEQELVRLAL PGRRGQYRFG | 60 |
| YVRGVKAGQR YGYRVHGAPQ EGMLFDPQKL LIDPYARGLS RATHWDDKLY EGDSAAMVAK | 120 |
| SVVVDDAFDW QGVGKPGIEP ARTVIYETHV KGFTRQHQGV PSELRGTYLG ICHPVIIEHL | 180 |
| KSLGVTSVQL MPVAAFMSEP RLEQLGLTNY WGYNPIAFFA PEPRYSAGEA VTEFKTMVRE | 240 |
| LHRAGLEVIL DVVYNHTAES GFDGPTLSFK GFDNAGYYAF EAGAHGPDYS RHANVTGCGN | 300 |
| SVNLDHPNSL RLVLDALRYW VTEMQVDGFR FDLAVTLARE AGEFDPMGAF FKAMMADPVL | 360 |
| ARVKLIAEPW DIGPFGYRLG QFPSQWLEIN DRYRDTVRAF WRGDAGKMGD FATRLVGSRD | 420 |
| LFPKNWRAPH TSVNYLCYHD GFTLEDLVSY NQRHNQANGE DNRDGHGNNL SNNHGVEGPT | 480 |
| LDPRVNNLRQ QQKRNLIATL LLSQGTPHFL AGDEMGRSQL GNNNAYCQDN QISWVNWQWR | 540 |
| PEDERLLAFT QQMMALRAES SVFANLQLSD DSWNGAPTSC HQVNWYHPDG HQLTDQDWHA | 600 |
| PMGQAFAMDI GMQQCEGERW YVLFNASDYD IQFRLPPPGE GLEWIQTIDT ATNDGLPFLP | 660 |
| DDIKRQVAVG RAHSLKLLER VSLPAVALAK EEVAITPDVA TVLPTGSQFP LAG | 713 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.