CAZyme3D

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Entry ID

Information for CAZyme ID: ATB31582.1

Basic Information

GenBank IDATB31582.1
FamilyCE2
Sequence Length374
UniProt IDA0A250IK39(100,100)Download
Average pLDDT?92.76
CAZy50 ID111144
CAZy50 RepNo, QRN95179.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1294270
KingdomBacteria
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyArchangiaceae
GenusMelittangium
SpeciesMelittangium boletus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSHLPTRSLT  RLGLALALLG  GCHPAAPVQV  SPRSPLLRFS  GRVDHGDPEG  PRLAWGGTSL60
TVRFTGTSLG  LRLLDLGKLE  EPAPNRFRFS  VDGAPFRDLY  VGEGPLLYRI  AEGLPPGEHV120
LLLEKETEPA  VGETQLLGLE  LDPDARLLPA  PPRLERRIEF  IGDSGLTGFG  IEGKNAQCSF180
NAETQRHSLT  WAALTARALN  AELSVVAYSG  KGVAVNYAND  PTPTLPQLYT  RTLPRREDGP240
WDFTAWVPDA  IVIQLGANDF  WKEHPGEARF  RDAYRSLVGS  IRSHYPQAHI  VCVLGSGVSD300
SHPKELQART  RVRGLLSGLV  DELHQAGDTR  VHFAEVPANR  EDEGLGCLWH  PSRKTHQRTA360
EQMTPLLRDW  LGWK374

Predicted 3D structure by AlphaFold2 with pLDDT = 92.76 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE2(157-365)

MSHLPTRSLT  RLGLALALLG  GCHPAAPVQV  SPRSPLLRFS  GRVDHGDPEG  PRLAWGGTSL60
TVRFTGTSLG  LRLLDLGKLE  EPAPNRFRFS  VDGAPFRDLY  VGEGPLLYRI  AEGLPPGEHV120
LLLEKETEPA  VGETQLLGLE  LDPDARLLPA  PPRLERRIEF  IGDSGLTGFG  IEGKNAQCSF180
NAETQRHSLT  WAALTARALN  AELSVVAYSG  KGVAVNYAND  PTPTLPQLYT  RTLPRREDGP240
WDFTAWVPDA  IVIQLGANDF  WKEHPGEARF  RDAYRSLVGS  IRSHYPQAHI  VCVLGSGVSD300
SHPKELQART  RVRGLLSGLV  DELHQAGDTR  VHFAEVPANR  EDEGLGCLWH  PSRKTHQRTA360
EQMTPLLRDW  LGWK374

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help