Information for CAZyme ID: ATA89770.1
Basic Information
| GenBank ID | ATA89770.1 |
| Family | GH2 |
| Sequence Length | 1036 |
| UniProt ID | A0A250FXC3(100,100) |
| Average pLDDT? | 95.29 |
| CAZy50 ID | 11886 |
| CAZy50 Rep | No, QEC70124.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1848904 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Capnocytophaga |
| Species | Capnocytophaga stomatis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MNKYFFFGLC FFAFFVGKAQ EIKPDPIFEN PSVQEENRLP MRSTYFAFEN NQVSQKEKSN | 60 |
| RFVDLNGVWK FFFNEDVRNA PKDFESVNFD DSKWDNFKVP ANWEFNGYGT PIYVNHPFEF | 120 |
| AVKNPNPPII PRDKTQPVGI YRRTFDLPAN WENQEVFLHL GAVKSAFRLY VNGKYVGLGK | 180 |
| DSKLESEFNL TNFVQKGKNT IAIEVRRWND GSYLEAQDYW RISGIQRNVY LYARPKVHLY | 240 |
| DIFIKSGLIN NYTDGTLEVT LEVFNQTPQD KGDTKIKMTL TDSEGNVVYN QTQRAIGLKR | 300 |
| LNGKTVMRFE GKIPNVKPWS AEIPNLYKLS TEVIASNGEL LEVVHQNVGF RSLEIKNAQF | 360 |
| LVNGKAVHFK GVNRHESHPE THHVMTKEQM ENDIRIMKEL NMNAVRLSHY PNAPYFYELC | 420 |
| DKYGFYVIDE ANIESHGMYY DPERTLGNDP SWEYAHRIRI ERMVQRDKNH PSVIAWSLGN | 480 |
| EAGNGWNFYK AYLWLKGFDT TRPVQYERST TEWNTDMIVP QYPDPDYMVK YATDNPQRPY | 540 |
| IMSEYAHAMG NSMGNFKEYW ELIEDERYPS LQGGYIWDWV DQGIYKTVNG KRIFGYGGDW | 600 |
| GDKNTPSDNN FLINGVIRAD RTWNPHAYEV RKVHQEVKFT LNEAKNEVNV FNKYFFRDLS | 660 |
| NYVFTAQLLK NGTSVETLNL GTFNVPPRQS VNVPIHFKMK TDHKNEYRLL VQGHIINAEG | 720 |
| RMKAGTFLAE EEFSLTEPIE SKFVSQSSAI ELTESANNFT LKNKTFSISF DKATGRFFDY | 780 |
| SVNKTQLIEK GPEFSLFRPL NDNDFGAGLN QSADYLKNPK LKLISLTPLK NIDNSYQITA | 840 |
| KYTLLNGDAS LVQVYTINSD GEIRVENQFK AEKGEHLLLL RIGNDLELPK SFENFTWYGR | 900 |
| GPWESYADRK YSASVGLYKG SVKEQYHPYV RPQESGNKTD VRWASVTNKK GKGFRIDYQD | 960 |
| ELLNVSALPY RWEQLYPSSQ KGQEHSELLE EDKSNHLRID HKQMGVGGID SWHALPLQKY | 1020 |
| RIPFKDYSYS YVIRPL | 1036 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.29 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH2(49-914)
| MNKYFFFGLC FFAFFVGKAQ EIKPDPIFEN PSVQEENRLP MRSTYFAFEN NQVSQKEKSN | 60 |
| RFVDLNGVWK FFFNEDVRNA PKDFESVNFD DSKWDNFKVP ANWEFNGYGT PIYVNHPFEF | 120 |
| AVKNPNPPII PRDKTQPVGI YRRTFDLPAN WENQEVFLHL GAVKSAFRLY VNGKYVGLGK | 180 |
| DSKLESEFNL TNFVQKGKNT IAIEVRRWND GSYLEAQDYW RISGIQRNVY LYARPKVHLY | 240 |
| DIFIKSGLIN NYTDGTLEVT LEVFNQTPQD KGDTKIKMTL TDSEGNVVYN QTQRAIGLKR | 300 |
| LNGKTVMRFE GKIPNVKPWS AEIPNLYKLS TEVIASNGEL LEVVHQNVGF RSLEIKNAQF | 360 |
| LVNGKAVHFK GVNRHESHPE THHVMTKEQM ENDIRIMKEL NMNAVRLSHY PNAPYFYELC | 420 |
| DKYGFYVIDE ANIESHGMYY DPERTLGNDP SWEYAHRIRI ERMVQRDKNH PSVIAWSLGN | 480 |
| EAGNGWNFYK AYLWLKGFDT TRPVQYERST TEWNTDMIVP QYPDPDYMVK YATDNPQRPY | 540 |
| IMSEYAHAMG NSMGNFKEYW ELIEDERYPS LQGGYIWDWV DQGIYKTVNG KRIFGYGGDW | 600 |
| GDKNTPSDNN FLINGVIRAD RTWNPHAYEV RKVHQEVKFT LNEAKNEVNV FNKYFFRDLS | 660 |
| NYVFTAQLLK NGTSVETLNL GTFNVPPRQS VNVPIHFKMK TDHKNEYRLL VQGHIINAEG | 720 |
| RMKAGTFLAE EEFSLTEPIE SKFVSQSSAI ELTESANNFT LKNKTFSISF DKATGRFFDY | 780 |
| SVNKTQLIEK GPEFSLFRPL NDNDFGAGLN QSADYLKNPK LKLISLTPLK NIDNSYQITA | 840 |
| KYTLLNGDAS LVQVYTINSD GEIRVENQFK AEKGEHLLLL RIGNDLELPK SFENFTWYGR | 900 |
| GPWESYADRK YSASVGLYKG SVKEQYHPYV RPQESGNKTD VRWASVTNKK GKGFRIDYQD | 960 |
| ELLNVSALPY RWEQLYPSSQ KGQEHSELLE EDKSNHLRID HKQMGVGGID SWHALPLQKY | 1020 |
| RIPFKDYSYS YVIRPL | 1036 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.