CAZyme3D

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Entry ID

Information for CAZyme ID: ASW57754.1

Basic Information

GenBank IDASW57754.1
FamilyCBM2, GH10
Sequence Length454
UniProt IDA0A248YVL4(100,100)Download
Average pLDDT?87.93
CAZy50 ID14267
CAZy50 RepNo, ADG73164.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID2024580
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusPlantactinospora
SpeciesPlantactinospora sp. KBS50

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTPSAPPRRA  TKVPRWVRGV  LAAGAASTLA  LGAVAVVSSS  ASAAASTLGA  AAAQSGRYFG60
TAISAGKLND  SAYTTLAARE  FNMVTAENEM  KIDATEPSQN  QFNFGPGDQV  YNWAVSHGMQ120
VRGHTLAWHS  QQPGWMQSLS  GTALRNAMIN  HIQKVMAHYQ  GKLAYWDVVN  EAFNEDGSRR180
QSNLQATGND  WIEVAFRTAR  AADSSVKLCY  NDYNIDNWSY  AKTQGVYNMV  RDFKSRGVPI240
DCVGLQAHFT  GGSSVPSNFQ  TTISSFAALG  VDVALTEVDV  TNASTSQYSA  LTQACVNVAR300
CVGITVWGVR  DSDSWRSGES  PLLFDGSGNK  KAAYNSVLNV  LNSVGGSTPP  PTTAAPTTAA360
PTTNPPTGNC  TATISAGSIW  NDRYNLSITV  TGSTTWTVTM  TVPTPAKIIA  TWNITATWPS420
SQVLIAKPNG  NGNTWGVTIQ  HNGNWTWPTV  TCTT454

Predicted 3D structure by AlphaFold2 with pLDDT = 87.93 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH10(51-339)+CBM2(370-452)

MTPSAPPRRA  TKVPRWVRGV  LAAGAASTLA  LGAVAVVSSS  ASAAASTLGA  AAAQSGRYFG60
TAISAGKLND  SAYTTLAARE  FNMVTAENEM  KIDATEPSQN  QFNFGPGDQV  YNWAVSHGMQ120
VRGHTLAWHS  QQPGWMQSLS  GTALRNAMIN  HIQKVMAHYQ  GKLAYWDVVN  EAFNEDGSRR180
QSNLQATGND  WIEVAFRTAR  AADSSVKLCY  NDYNIDNWSY  AKTQGVYNMV  RDFKSRGVPI240
DCVGLQAHFT  GGSSVPSNFQ  TTISSFAALG  VDVALTEVDV  TNASTSQYSA  LTQACVNVAR300
CVGITVWGVR  DSDSWRSGES  PLLFDGSGNK  KAAYNSVLNV  LNSVGGSTPP  PTTAAPTTAA360
PTTNPPTGNC  TATISAGSIW  NDRYNLSITV  TGSTTWTVTM  TVPTPAKIIA  TWNITATWPS420
SQVLIAKPNG  NGNTWGVTIQ  HNGNWTWPTV  TCTT454

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help