CAZyme3D

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Entry ID

Information for CAZyme ID: ASV75458.1

Basic Information

GenBank IDASV75458.1
FamilyGH50
Sequence Length686
UniProt IDA0A286RHM0(100,100)Download
Average pLDDT?94.53
CAZy50 ID38814
CAZy50 RepNo, QDV65278.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1331910
KingdomBacteria
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPirellulales
FamilyThermoguttaceae
GenusThermogutta
SpeciesThermogutta terrifontis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MFPGRQAQAE  QPNGASVEVL  WSPQKADGYR  LERATAEVAS  RDGVSILRIR  PEAGADSAMV60
RFPAPEKTWN  LTAFRYVGIE  LHNPSADTLR  VQWRARSKGK  NLSRDYILEP  GERVHLRLTL120
RRVVPEALKD  VFFGMRGFPE  LLDPERGIDV  ATVEELALTM  RGFSANTVLE  VQKVLASESF180
QTPPWWSGDT  SNLFPLIDEF  GQYRHRDWPG  KIHSAAELAE  RIREEDRDLA  AHPGPGDWDQ240
FGGWKSGPIL  EATGHFRVTK  HEGRWWLVDP  EGRLFWSHGV  DCVRSTTAVT  PITDREHWFQ300
LPPVDSPFGV  FYGRGSWAPH  GYYQKKESYR  TFCFSGANLL  LKYGTNWEKT  FNERMHQRLR360
SWGINTIGNW  SDPAIYSMRR  TPYVVTLSSG  ARRIEGSTGY  WGRFADPFDP  DFDRGLLAAM420
EREANSSAKD  PWCLGYFVDN  ELSWGDELSL  AVATVRSPAD  QPAKKVFQER  LRQKYGDVAK480
LNAIWGTSFA  SWDDFLQKTD  EVDQKKARED  LAAFCSEIAE  TYFRRCHDAV  KKFAPDKLYL540
GCRFAWVNDR  AIRAAALYCD  VISFNRYDVS  VASLRLPDGI  DKPVIIGEFH  FGALDRGMFH600
TGLREAADQA  DRAECYRRYV  KSALLHPQIV  GTHWFQLMDQ  ATTGRGDGEN  YQIGFLDVCD660
TPYPEIIQAA  RDIASVMYTL  RSSQGR686

Predicted 3D structure by AlphaFold2 with pLDDT = 94.53 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH50(66-679)

MFPGRQAQAE  QPNGASVEVL  WSPQKADGYR  LERATAEVAS  RDGVSILRIR  PEAGADSAMV60
RFPAPEKTWN  LTAFRYVGIE  LHNPSADTLR  VQWRARSKGK  NLSRDYILEP  GERVHLRLTL120
RRVVPEALKD  VFFGMRGFPE  LLDPERGIDV  ATVEELALTM  RGFSANTVLE  VQKVLASESF180
QTPPWWSGDT  SNLFPLIDEF  GQYRHRDWPG  KIHSAAELAE  RIREEDRDLA  AHPGPGDWDQ240
FGGWKSGPIL  EATGHFRVTK  HEGRWWLVDP  EGRLFWSHGV  DCVRSTTAVT  PITDREHWFQ300
LPPVDSPFGV  FYGRGSWAPH  GYYQKKESYR  TFCFSGANLL  LKYGTNWEKT  FNERMHQRLR360
SWGINTIGNW  SDPAIYSMRR  TPYVVTLSSG  ARRIEGSTGY  WGRFADPFDP  DFDRGLLAAM420
EREANSSAKD  PWCLGYFVDN  ELSWGDELSL  AVATVRSPAD  QPAKKVFQER  LRQKYGDVAK480
LNAIWGTSFA  SWDDFLQKTD  EVDQKKARED  LAAFCSEIAE  TYFRRCHDAV  KKFAPDKLYL540
GCRFAWVNDR  AIRAAALYCD  VISFNRYDVS  VASLRLPDGI  DKPVIIGEFH  FGALDRGMFH600
TGLREAADQA  DRAECYRRYV  KSALLHPQIV  GTHWFQLMDQ  ATTGRGDGEN  YQIGFLDVCD660
TPYPEIIQAA  RDIASVMYTL  RSSQGR686

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help