CAZyme3D

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Entry ID

Information for CAZyme ID: AST86065.1

Basic Information

GenBank IDAST86065.1
FamilyCE4
Sequence Length320
UniProt IDA0A0S4U5R9(100,100)Download
Average pLDDT?96.19
CAZy50 ID35812
CAZy50 RepNo, QXC61059.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1310165
KingdomBacteria
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusRalstonia
SpeciesRalstonia pseudosolanacearum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTHKNYPRDL  IGYGKTPPDP  KWPGGARIAL  QFVLNYEEGG  ENCVLHGDAG  SEPFLSEIIG60
AAAYPARHMS  MESLYEYGAR  AGVWRILREF  EQRGLPLTIF  GVSMALQRHP  DVTQAFVDLG120
HEIACHGWRW  IHYQHIDEAT  EREHMRIGVE  IIRELTGSAP  LGWYTGRDSP  NTRRLVVEHG180
GFVYDADYYG  DDLPFWTEVE  TSVGERKPHL  VVPYTLDTND  MRFASPQGFN  TADHFYQYLK240
DAFDVLYEEG  DPDGLAQPKM  LSIGMHCRLL  GRPARLRALQ  RFLDYVQSHD  KVWICRRIDI300
ARHWIEHHPY  TGHPVPSTAA  320

Predicted 3D structure by AlphaFold2 with pLDDT = 96.19 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE4(83-180)

MTHKNYPRDL  IGYGKTPPDP  KWPGGARIAL  QFVLNYEEGG  ENCVLHGDAG  SEPFLSEIIG60
AAAYPARHMS  MESLYEYGAR  AGVWRILREF  EQRGLPLTIF  GVSMALQRHP  DVTQAFVDLG120
HEIACHGWRW  IHYQHIDEAT  EREHMRIGVE  IIRELTGSAP  LGWYTGRDSP  NTRRLVVEHG180
GFVYDADYYG  DDLPFWTEVE  TSVGERKPHL  VVPYTLDTND  MRFASPQGFN  TADHFYQYLK240
DAFDVLYEEG  DPDGLAQPKM  LSIGMHCRLL  GRPARLRALQ  RFLDYVQSHD  KVWICRRIDI300
ARHWIEHHPY  TGHPVPSTAA  320

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help