CAZyme3D

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Entry ID

Information for CAZyme ID: ASS88944.1

Basic Information

GenBank IDASS88944.1
FamilyGT108
Sequence Length313
UniProt IDA0A165X1F4(100,100)Download
Average pLDDT?97.07
CAZy50 ID138756
CAZy50 RepNo, AEV20975.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID33936
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusAeribacillus
SpeciesAeribacillus pallidus
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A165X1F4.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRLEKTGIKS  SAKLLKEFEN  APQPINPQKL  IFKGVGNRDV  YNISAPFLDD  GELVIAGRVE60
PRNSEHSEVY  FFVNRDGKWI  PKEGAPKFQL  QDPFVTRIGG  DLVFGGVEIF  PHPTFKSSLW120
WRTLFYKGKN  IADLEKFAKG  PEGMKDIRVI  ELKDGSIGVL  TRPQGEKGGL  GKIGFIRIPT180
LDDLNPENLE  KATLLEGQFT  DEEWGGANEL  HLLSNGLIGV  LGHIASKDEQ  GNRHYYPMVF240
VLDPDTMKFS  DMELIATRSH  FLKGAAKRPD  LVNVVFSGGL  IRKGDGTADL  YVGTSDAEAQ300
KITIADPFVK  YEK313

Predicted 3D structure by AlphaFold2 with pLDDT = 97.07 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT108(23-308)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help