CAZyme3D

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Entry ID

Information for CAZyme ID: ASR48765.1

Basic Information

GenBank IDASR48765.1
FamilyCBM36, GH11
Sequence Length361
UniProt IDA0A222WRX3(100,100)Download
Average pLDDT?88.43
CAZy50 ID5144
CAZy50 RepNo, CUH92150.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID172713
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus kribbensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKQKRMRLFL  AILICFSLTL  PAVTAQAATT  ITSNQSGTQD  GYYYELWKDS  GTTSMTLNSG60
GTFSAQWSNI  GNALFRKGKK  FNETQTHQQI  GNISVNYSAN  YQPNGNSYLC  VYGWTVDPLV120
EYYIVDSWGS  WRPPGATSKG  TITVDGGTYD  IYETIRVNQP  SIKGNATFKQ  YWSVRTSKRT180
SGTISVSEHF  KKWESLGMTM  GKMYETSLTV  EGYQSSGSAT  VTSNTITIGG  NSGGGTTPPP240
STATKVEAES  MTKGGQYTGN  ISSPFNGVAL  YANNDLVKYT  QYFESGTHSF  SLRGASNNSN300
MARVDLKIGG  QTKGTFYFGG  SNPAVYTLNN  VSHGTGNQEI  ELVVTADNGT  WDAYIDYLEI360
N361

Predicted 3D structure by AlphaFold2 with pLDDT = 88.43 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH11(40-222)+CBM36(247-360)

MKQKRMRLFL  AILICFSLTL  PAVTAQAATT  ITSNQSGTQD  GYYYELWKDS  GTTSMTLNSG60
GTFSAQWSNI  GNALFRKGKK  FNETQTHQQI  GNISVNYSAN  YQPNGNSYLC  VYGWTVDPLV120
EYYIVDSWGS  WRPPGATSKG  TITVDGGTYD  IYETIRVNQP  SIKGNATFKQ  YWSVRTSKRT180
SGTISVSEHF  KKWESLGMTM  GKMYETSLTV  EGYQSSGSAT  VTSNTITIGG  NSGGGTTPPP240
STATKVEAES  MTKGGQYTGN  ISSPFNGVAL  YANNDLVKYT  QYFESGTHSF  SLRGASNNSN300
MARVDLKIGG  QTKGTFYFGG  SNPAVYTLNN  VSHGTGNQEI  ELVVTADNGT  WDAYIDYLEI360
N361

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help