Information for CAZyme ID: ASN19053.1
Basic Information
| GenBank ID | ASN19053.1 |
| Family | CBM48, GH13_9 |
| Sequence Length | 1223 |
| UniProt ID | A0A221NGG6(100,100) |
| Average pLDDT? | 89.86 |
| CAZy50 ID | 5948 |
| CAZy50 Rep | No, SNV20343.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2020486 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Micrococcaceae |
| Genus | Arthrobacter |
| Species | Arthrobacter sp. YN |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSKANLNPSV EGLLRHWLPG KRWFPVKSPD FALEQVGAVS LPGTNGDTSF EVMLLAVTHR | 60 |
| TADGGPRTDV VQVPLSYRSQ PLVDAPAALL GELTDDSGLR LVYDAVYDSD FVTAWLELMR | 120 |
| SEGSVGGARG HLTRGRVALP ENPTSVRVLS GEQSNTSVII DDGDSAAIVK IFRVLAAGKN | 180 |
| PEVELGAALT AAGTTEVPAT LGWITGSWEG PASNGSAPAT GELTVAHEFL LGGLDAWRLA | 240 |
| VEAAAAGKDF TAEARGLGAA TASVHARLAE TFGTQDGQEQ GSDIIATVAR RVRQSWAEAA | 300 |
| SAVGPYDDNL DQLLAALDPR DVGQLQRVHG DLHLGQILLV PGDEPVPGDD RRPGRWAILD | 360 |
| FEGEPLRTID ERNNPDLPLR DVTGMLRSFD YAAGAATREN SHANVPETWV DDCAAAFLEG | 420 |
| YSDVTPGTID RRSPLFVALW LDKALYEVVY ELRNRPDWLS IPVNASRRIL DNTSRGKHAA | 480 |
| ATAEGNDMTG SARTERPRVP LHVDSETLER VAAGAYHAPH SVLGAHLDDH GHVTVRTVKH | 540 |
| LAKSVAVVTE SGRTDMEHEA HGVWAAVLEP LQAGHVPDYR LEVVYDVEPV TIDDPYHYLP | 600 |
| TVGEVDLHLI GEGRHERLWD VLGAHVQHYR SALSEVDGVS FAVWAPNAQA VRVKGDFNGW | 660 |
| DGRQHGMRSL GSSGVWELFI PGVVAGACYK YEILTKSGHW IEKADPLAFG TEVPPLTASR | 720 |
| VVDASYRFKD AEWMAARAQK DPHNSPMSVY EVHLGSWRLG LGYKELAKEL VDYVKWLGFS | 780 |
| HVEFMPVAEH PFGGSWGYQV TSYFAPTSRF GHPDEFRFLV DSLHQAGIGV LLDWVPAHFP | 840 |
| KDSWALAQFD GQPLYEHSDP ALGEHPDWGT LIFDFGRSEV RNFLVSNALY WLEEFHIDGL | 900 |
| RVDAVASMIY LDYSREEGQW KPNKFGGREN LEAISFMQEV NATVYKSHPG AIIIAEESTA | 960 |
| FPGVTAPTNH GGLGFGLKWN MGWMHDSLKY ISEDPINRKW HHGTITFSLV YAFTENFLLP | 1020 |
| ISHDEVVHGK GSMLRKMPGD RWQQLANLRA FFAYQWAHPG KQLIFMGTEF GQEAEWSEQY | 1080 |
| GLDWFLADIP AHRGLQLLVK DLNELYTSTP ALYQRDNEAG GFQWINGGDA DHNVLTFIRW | 1140 |
| DQDGKPLVCA VNFSGGPHKD YILGVPAAGE WTEVLNTDSE TYGGSGVVNA GSLKASSPGT | 1200 |
| DGQPAALTVT LPPLGASWFT PAE | 1223 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.86 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM48(523-597)+CBM48(622-710)+GH13_9(772-1072)
| MSKANLNPSV EGLLRHWLPG KRWFPVKSPD FALEQVGAVS LPGTNGDTSF EVMLLAVTHR | 60 |
| TADGGPRTDV VQVPLSYRSQ PLVDAPAALL GELTDDSGLR LVYDAVYDSD FVTAWLELMR | 120 |
| SEGSVGGARG HLTRGRVALP ENPTSVRVLS GEQSNTSVII DDGDSAAIVK IFRVLAAGKN | 180 |
| PEVELGAALT AAGTTEVPAT LGWITGSWEG PASNGSAPAT GELTVAHEFL LGGLDAWRLA | 240 |
| VEAAAAGKDF TAEARGLGAA TASVHARLAE TFGTQDGQEQ GSDIIATVAR RVRQSWAEAA | 300 |
| SAVGPYDDNL DQLLAALDPR DVGQLQRVHG DLHLGQILLV PGDEPVPGDD RRPGRWAILD | 360 |
| FEGEPLRTID ERNNPDLPLR DVTGMLRSFD YAAGAATREN SHANVPETWV DDCAAAFLEG | 420 |
| YSDVTPGTID RRSPLFVALW LDKALYEVVY ELRNRPDWLS IPVNASRRIL DNTSRGKHAA | 480 |
| ATAEGNDMTG SARTERPRVP LHVDSETLER VAAGAYHAPH SVLGAHLDDH GHVTVRTVKH | 540 |
| LAKSVAVVTE SGRTDMEHEA HGVWAAVLEP LQAGHVPDYR LEVVYDVEPV TIDDPYHYLP | 600 |
| TVGEVDLHLI GEGRHERLWD VLGAHVQHYR SALSEVDGVS FAVWAPNAQA VRVKGDFNGW | 660 |
| DGRQHGMRSL GSSGVWELFI PGVVAGACYK YEILTKSGHW IEKADPLAFG TEVPPLTASR | 720 |
| VVDASYRFKD AEWMAARAQK DPHNSPMSVY EVHLGSWRLG LGYKELAKEL VDYVKWLGFS | 780 |
| HVEFMPVAEH PFGGSWGYQV TSYFAPTSRF GHPDEFRFLV DSLHQAGIGV LLDWVPAHFP | 840 |
| KDSWALAQFD GQPLYEHSDP ALGEHPDWGT LIFDFGRSEV RNFLVSNALY WLEEFHIDGL | 900 |
| RVDAVASMIY LDYSREEGQW KPNKFGGREN LEAISFMQEV NATVYKSHPG AIIIAEESTA | 960 |
| FPGVTAPTNH GGLGFGLKWN MGWMHDSLKY ISEDPINRKW HHGTITFSLV YAFTENFLLP | 1020 |
| ISHDEVVHGK GSMLRKMPGD RWQQLANLRA FFAYQWAHPG KQLIFMGTEF GQEAEWSEQY | 1080 |
| GLDWFLADIP AHRGLQLLVK DLNELYTSTP ALYQRDNEAG GFQWINGGDA DHNVLTFIRW | 1140 |
| DQDGKPLVCA VNFSGGPHKD YILGVPAAGE WTEVLNTDSE TYGGSGVVNA GSLKASSPGT | 1200 |
| DGQPAALTVT LPPLGASWFT PAE | 1223 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.