Information for CAZyme ID: ASL86743.1
Basic Information
| GenBank ID | ASL86743.1 |
| Family | GH3 |
| Sequence Length | 765 |
| UniProt ID | A0A221DMC3(100,100) |
| Average pLDDT? | 95.38 |
| CAZy50 ID | 3882 |
| CAZy50 Rep | No, SQK97389.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 615 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Yersiniaceae |
| Genus | Serratia |
| Species | Serratia marcescens |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKWLCVVSML SGLALSPAFA QETPITQGIH AQQRDAFVSH LMKQMTLEEK IGQLRLISVG | 60 |
| PDNPKEAIRE GIRKGQIGAI FNTVTRPDIR VMQDQAMQLS RLKIPLFFAY DVVHGQRTVF | 120 |
| PISLGLAASF DLEAIALSAR VAAQEASDDG LNMTFAPMVD ITRDPRWGRV SEGFGEDTWL | 180 |
| VSKIAKVMVD GYQNGDPAKP GSVMASVKHF ALYGAVEGGR DYNTVDMSPL RMYQDYLPPY | 240 |
| KAAVDAGSGG VMVSLNSVNG VPATANPWLL KDLLRDQWGF KGITISDHGA IKELIKHGVA | 300 |
| ADARDAVRLA ITSGVDMSMS DEFYDKYLPG LVKDGLVPES DIDRACRDVL NTKYDMGLFT | 360 |
| DPYVHLGPAG SDPQDTNAES RLHRAEARVV ARKTMVLLKN DKQTLPLSKQ ATIALVGPMA | 420 |
| DSQRDVMGSW SAAGVVKQSV TLREGLERAV GDKARILYAK GANVTQDKGI IDYLNEYEPA | 480 |
| VAFDTRSPQQ MIDEAVQAAN KADVVVAVVG ESQGMAHEAS SRADITIPQS QRDLIAALKA | 540 |
| TGKPLVLVLM NGRPLALSWE SEQADAMLET WYSGTEGGNA VADVLFGDYN PSGKLPMTFP | 600 |
| RSVGQIPMYY NHLNTGRPFG KENPGKYTSR YFDSPNGPLY PFGYGLSYTT FSLSDLKLSS | 660 |
| PTMARNGKLT ASVTLKNTGK YDGATVVQLY LQDVTASVSR PVKELRNFKK VTLKAGQSQQ | 720 |
| VELPISEDDL KFYNASLKWG AEPGKFNVFV GLDSDNVQAQ SFTLK | 765 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.38 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH3(98-319)
| MKWLCVVSML SGLALSPAFA QETPITQGIH AQQRDAFVSH LMKQMTLEEK IGQLRLISVG | 60 |
| PDNPKEAIRE GIRKGQIGAI FNTVTRPDIR VMQDQAMQLS RLKIPLFFAY DVVHGQRTVF | 120 |
| PISLGLAASF DLEAIALSAR VAAQEASDDG LNMTFAPMVD ITRDPRWGRV SEGFGEDTWL | 180 |
| VSKIAKVMVD GYQNGDPAKP GSVMASVKHF ALYGAVEGGR DYNTVDMSPL RMYQDYLPPY | 240 |
| KAAVDAGSGG VMVSLNSVNG VPATANPWLL KDLLRDQWGF KGITISDHGA IKELIKHGVA | 300 |
| ADARDAVRLA ITSGVDMSMS DEFYDKYLPG LVKDGLVPES DIDRACRDVL NTKYDMGLFT | 360 |
| DPYVHLGPAG SDPQDTNAES RLHRAEARVV ARKTMVLLKN DKQTLPLSKQ ATIALVGPMA | 420 |
| DSQRDVMGSW SAAGVVKQSV TLREGLERAV GDKARILYAK GANVTQDKGI IDYLNEYEPA | 480 |
| VAFDTRSPQQ MIDEAVQAAN KADVVVAVVG ESQGMAHEAS SRADITIPQS QRDLIAALKA | 540 |
| TGKPLVLVLM NGRPLALSWE SEQADAMLET WYSGTEGGNA VADVLFGDYN PSGKLPMTFP | 600 |
| RSVGQIPMYY NHLNTGRPFG KENPGKYTSR YFDSPNGPLY PFGYGLSYTT FSLSDLKLSS | 660 |
| PTMARNGKLT ASVTLKNTGK YDGATVVQLY LQDVTASVSR PVKELRNFKK VTLKAGQSQQ | 720 |
| VELPISEDDL KFYNASLKWG AEPGKFNVFV GLDSDNVQAQ SFTLK | 765 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.