Information for CAZyme ID: ASG55490.1
Basic Information
| GenBank ID | ASG55490.1 |
| Family | GT4 |
| Sequence Length | 840 |
| UniProt ID | A0A248KCE9(100,100) |
| Average pLDDT? | 93.09 |
| CAZy50 ID | 23476 |
| CAZy50 Rep | No, AGT23508.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1243617 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Salmonella |
| Species | Salmonella bongori |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MHILIDVQGL QSESKFRGIG RSTLAMSRAI IQNSGDHRVS ILINGMYPID NINHVKKAYR | 60 |
| DILTDEEMFI FSAVGPTAYC NTDNHDRSKA AFAARDIAIA NINPDIVYVI NFFEGHSDSY | 120 |
| SISIPADNVP WKTVCVCHDL IPLLNRDYYL RDPNFREFYM NKLAEFGHAD AFFAISQSAV | 180 |
| QELIEYTNIS SSRIHNISSA VGEEFCAREY SADEISELKR KHHLPDEFIL TLAMIEPRKN | 240 |
| IEALLKAYSQ LPKTLQQRYP MVLAYKVNAD DLERILSLAE SYGLSRNQLI FTGFLADDDL | 300 |
| IALYTLCKLF VFPSLHEGFG LPPLEAMRCG AATLGSNVTS LPEVIGWDEA MFDPRDVNDI | 360 |
| RQLMEKALTD DAFFSALKAH ALTQSAKFSW ANTARLAIDG FSRLLNEKED NVSLSVAEVC | 420 |
| ASRFATIQAI DTLSEVDRIG LAWAIARNSF KSHKRKLLVD ISVLVKHDAK TGIQRVSRSI | 480 |
| LSELLKSGVE GYEVSAVYYT PGECYRYANA YLSTHFNGEF GSDEPVLFSK DDILLVTDRT | 540 |
| EHLFPTGSTP IDHIRSAGAF VCFLVHDILP IRRPEWSIEG IQREFPIWLS HLAEHADRLI | 600 |
| CVSASVAEDV KRWIAENDHW VDVNPLLEVS HFHLGADLDN SLPTMGMPEN ADELLAEMAV | 660 |
| EPSFIMVGTI EPRKGHAQTL AAFEQLWRKG KNYNLFIVGK QGWKVDALCE CLRHHPQLNK | 720 |
| RLFWLQNISD EFLSKLYAQS RALIFASLGE GFGLPLIEAA QKKLPVIIRD IPVFKEIAQE | 780 |
| HAFYFSGESP GNIAKAIEEW LILYRQNIHP RSENINWLTW KESTQFLLKS LPIRRSAADK | 840 |
| 840 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.09 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT4(226-372)+GT4(661-802)
| MHILIDVQGL QSESKFRGIG RSTLAMSRAI IQNSGDHRVS ILINGMYPID NINHVKKAYR | 60 |
| DILTDEEMFI FSAVGPTAYC NTDNHDRSKA AFAARDIAIA NINPDIVYVI NFFEGHSDSY | 120 |
| SISIPADNVP WKTVCVCHDL IPLLNRDYYL RDPNFREFYM NKLAEFGHAD AFFAISQSAV | 180 |
| QELIEYTNIS SSRIHNISSA VGEEFCAREY SADEISELKR KHHLPDEFIL TLAMIEPRKN | 240 |
| IEALLKAYSQ LPKTLQQRYP MVLAYKVNAD DLERILSLAE SYGLSRNQLI FTGFLADDDL | 300 |
| IALYTLCKLF VFPSLHEGFG LPPLEAMRCG AATLGSNVTS LPEVIGWDEA MFDPRDVNDI | 360 |
| RQLMEKALTD DAFFSALKAH ALTQSAKFSW ANTARLAIDG FSRLLNEKED NVSLSVAEVC | 420 |
| ASRFATIQAI DTLSEVDRIG LAWAIARNSF KSHKRKLLVD ISVLVKHDAK TGIQRVSRSI | 480 |
| LSELLKSGVE GYEVSAVYYT PGECYRYANA YLSTHFNGEF GSDEPVLFSK DDILLVTDRT | 540 |
| EHLFPTGSTP IDHIRSAGAF VCFLVHDILP IRRPEWSIEG IQREFPIWLS HLAEHADRLI | 600 |
| CVSASVAEDV KRWIAENDHW VDVNPLLEVS HFHLGADLDN SLPTMGMPEN ADELLAEMAV | 660 |
| EPSFIMVGTI EPRKGHAQTL AAFEQLWRKG KNYNLFIVGK QGWKVDALCE CLRHHPQLNK | 720 |
| RLFWLQNISD EFLSKLYAQS RALIFASLGE GFGLPLIEAA QKKLPVIIRD IPVFKEIAQE | 780 |
| HAFYFSGESP GNIAKAIEEW LILYRQNIHP RSENINWLTW KESTQFLLKS LPIRRSAADK | 840 |
| 840 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.