CAZyme3D

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Entry ID

Information for CAZyme ID: ASA21668.1

Basic Information

GenBank IDASA21668.1
FamilyGH43_11
Sequence Length541
UniProt IDA0A2Z2KRP1(100,100)Download
Average pLDDT?95.06
CAZy50 ID59921
CAZy50 RepNo, BDF47874.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID414771
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus donghaensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSNKIINPVL  RGFNPDPSIV  RVEDDYYIAT  STFEWFPGVQ  IHHSRDLIHW  QLLTHPLNTV60
AQLDLRGVGA  SQGIWAPCLT  YDNSIYYLVY  TVVNSFYVKM  YDTPNYLVTA  TDIRGEWSEP120
VYLNSYGFDP  SLFHDDDGRK  YIVSMVTDHR  VNKRYRGHLV  IQEYSVDEQV  MIGEPVTIYA180
SNDTYLEGPH  IYKRNGYYYL  FAADTGTGEG  HGQSILRSRN  LLGPYEAYKG  NSMMTSRDNP240
ELLLQKAGHG  DLVETQNGEW  YMAHLCGRAL  ENRTEKGDRK  YTLGRETALQ  KMEWTEDGWL300
RLANGTTLPD  IEVDAPDLPL  HPFPVRPARD  DFNGDKLDIH  FQSLRIPLDH  TFYSLTERAG360
FLRLYGREGL  GSKYRQSLVA  RRWQEHAFTA  STCLEFDPAS  YKQMAGLILL  YDTQNYYYLH420
VTHHEDLGRC  ISIVCAVNNN  NSEPIGYIAL  PDETEQIWLR  AKVDHDKLQF  AYSVNGEDRF480
ITIGPVLDAS  TLSDEACQEG  WFTGSFVGIC  CQDLTGFRKP  ADFDYFEYYN  RDPKGAVADY540
A541

Predicted 3D structure by AlphaFold2 with pLDDT = 95.06 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH43_11(5-300)+CBM91(327-530)

MSNKIINPVL  RGFNPDPSIV  RVEDDYYIAT  STFEWFPGVQ  IHHSRDLIHW  QLLTHPLNTV60
AQLDLRGVGA  SQGIWAPCLT  YDNSIYYLVY  TVVNSFYVKM  YDTPNYLVTA  TDIRGEWSEP120
VYLNSYGFDP  SLFHDDDGRK  YIVSMVTDHR  VNKRYRGHLV  IQEYSVDEQV  MIGEPVTIYA180
SNDTYLEGPH  IYKRNGYYYL  FAADTGTGEG  HGQSILRSRN  LLGPYEAYKG  NSMMTSRDNP240
ELLLQKAGHG  DLVETQNGEW  YMAHLCGRAL  ENRTEKGDRK  YTLGRETALQ  KMEWTEDGWL300
RLANGTTLPD  IEVDAPDLPL  HPFPVRPARD  DFNGDKLDIH  FQSLRIPLDH  TFYSLTERAG360
FLRLYGREGL  GSKYRQSLVA  RRWQEHAFTA  STCLEFDPAS  YKQMAGLILL  YDTQNYYYLH420
VTHHEDLGRC  ISIVCAVNNN  NSEPIGYIAL  PDETEQIWLR  AKVDHDKLQF  AYSVNGEDRF480
ITIGPVLDAS  TLSDEACQEG  WFTGSFVGIC  CQDLTGFRKP  ADFDYFEYYN  RDPKGAVADY540
A541

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help