Information for CAZyme ID: ARZ75875.1
Basic Information
| GenBank ID | ARZ75875.1 |
| Family | GH92 |
| Sequence Length | 1114 |
| UniProt ID | A0A1Z2LNT6(100,100) |
| Average pLDDT? | 94.23 |
| CAZy50 ID | 3103 |
| CAZy50 Rep | No, AQZ61224.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2005046 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Xanthomonadales |
| Family | Xanthomonadaceae |
| Genus | Stenotrophomonas |
| Species | Stenotrophomonas sp. WZN-1 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTLSDPHRAL LPLSLALACA TSAMPVLAQG LQTSFEPGEP APTQAAGGLR VTIGNGPAAP | 60 |
| YTAKRNAGYS GLHALRYSSE GGSARRELFK ADLPIQADTT LSWLVLPEIV GKDTVASTYV | 120 |
| SLDLLLDDGS RVSAGAARDQ HGVAIGARAQ GESKTLYPQQ WARKAVRLGD VPALKGRRVV | 180 |
| AIELEVASAE GAPVSGWIDD VRLDTVPRQQ PQRVSDWVLT TRGTQANGTF SRGNNFPATA | 240 |
| VPHGFNFWTP VTDAGALNWL YRWNEQNDAR NRPQLQALAL SHQPSPWMGD RQTFQVMPSS | 300 |
| SRGAPEADRR KRALSFDRSH ESARPYRYDV RFDNGIAAAI APTDHAALFR FDFPEGGDAN | 360 |
| LLFDNVDARG GLTLDAATQT LSGYTDTRSG LSNGASRMYV VASFDKPWRS NGRLDTGRPT | 420 |
| GYIKFDAGSD RRVTMRIATS LISVEQARHN LALEIAATDT LESVAGRAQD AWDARLARFD | 480 |
| IGDASDDQKT TLYSSLYRLY LYPNSGHENA GSAAMPDWRY ANQASASDDN TEGSANRSFT | 540 |
| GVRDGKVFVN NGFWDTFRTT WPAYALFTPD DAGQMVQGFI EQYRAGGWIA RWSSPGYADL | 600 |
| MVGTSSDVAF ADAWLKGIGG FDPAEAYAAA LKNATVVPPD RHVGRKGMDR STFRGYASAD | 660 |
| VHEGMSWTME GALNDFGIAN MADALAKRAT TPAARERYST EAEYFRYRAA SYTTMFDPAA | 720 |
| GFFQGRTADG RWRVDAKDYD PRVWGHDYTE SNGWTFAFTA AHDGEGLAAL YGGRGKLAAK | 780 |
| LDAFFATPET ADPALAGSYG STIHEMTEAR DVRMGMYAHS NQPAHHIPWM YLYAGQPWKT | 840 |
| QQHVREILSR LYVGSEIGQG YPGDEDNGET SAWYVLASLG LYPLRMGAPE YVIGSPAFQH | 900 |
| ARVELQGGAV LTVNAANNSR ENVYVQSLKI NGTPWTKTWV PHDLIAKGAT LDFVMGPQPS | 960 |
| RWGSGVDDVP RSLTARGQRP QLLHDLLGSG AKATLADGRA LPALVDDDAA TTVGLGGGAT | 1020 |
| IALTDVAEGS PTMYTLTSGD GRVQGGEWSL EARNGNGRWI VLDQRSGEAF ESARQTRPFR | 1080 |
| IAKPGRYSEY RLRLAAPGRL PLAEIELLAP SAVQ | 1114 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.23 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH92(421-959)
| MTLSDPHRAL LPLSLALACA TSAMPVLAQG LQTSFEPGEP APTQAAGGLR VTIGNGPAAP | 60 |
| YTAKRNAGYS GLHALRYSSE GGSARRELFK ADLPIQADTT LSWLVLPEIV GKDTVASTYV | 120 |
| SLDLLLDDGS RVSAGAARDQ HGVAIGARAQ GESKTLYPQQ WARKAVRLGD VPALKGRRVV | 180 |
| AIELEVASAE GAPVSGWIDD VRLDTVPRQQ PQRVSDWVLT TRGTQANGTF SRGNNFPATA | 240 |
| VPHGFNFWTP VTDAGALNWL YRWNEQNDAR NRPQLQALAL SHQPSPWMGD RQTFQVMPSS | 300 |
| SRGAPEADRR KRALSFDRSH ESARPYRYDV RFDNGIAAAI APTDHAALFR FDFPEGGDAN | 360 |
| LLFDNVDARG GLTLDAATQT LSGYTDTRSG LSNGASRMYV VASFDKPWRS NGRLDTGRPT | 420 |
| GYIKFDAGSD RRVTMRIATS LISVEQARHN LALEIAATDT LESVAGRAQD AWDARLARFD | 480 |
| IGDASDDQKT TLYSSLYRLY LYPNSGHENA GSAAMPDWRY ANQASASDDN TEGSANRSFT | 540 |
| GVRDGKVFVN NGFWDTFRTT WPAYALFTPD DAGQMVQGFI EQYRAGGWIA RWSSPGYADL | 600 |
| MVGTSSDVAF ADAWLKGIGG FDPAEAYAAA LKNATVVPPD RHVGRKGMDR STFRGYASAD | 660 |
| VHEGMSWTME GALNDFGIAN MADALAKRAT TPAARERYST EAEYFRYRAA SYTTMFDPAA | 720 |
| GFFQGRTADG RWRVDAKDYD PRVWGHDYTE SNGWTFAFTA AHDGEGLAAL YGGRGKLAAK | 780 |
| LDAFFATPET ADPALAGSYG STIHEMTEAR DVRMGMYAHS NQPAHHIPWM YLYAGQPWKT | 840 |
| QQHVREILSR LYVGSEIGQG YPGDEDNGET SAWYVLASLG LYPLRMGAPE YVIGSPAFQH | 900 |
| ARVELQGGAV LTVNAANNSR ENVYVQSLKI NGTPWTKTWV PHDLIAKGAT LDFVMGPQPS | 960 |
| RWGSGVDDVP RSLTARGQRP QLLHDLLGSG AKATLADGRA LPALVDDDAA TTVGLGGGAT | 1020 |
| IALTDVAEGS PTMYTLTSGD GRVQGGEWSL EARNGNGRWI VLDQRSGEAF ESARQTRPFR | 1080 |
| IAKPGRYSEY RLRLAAPGRL PLAEIELLAP SAVQ | 1114 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.