Information for CAZyme ID: ARV61434.1
Basic Information
| GenBank ID | ARV61434.1 |
| Family | GT2 |
| Sequence Length | 865 |
| UniProt ID | A0A1Y0RMZ0(100,100) |
| Average pLDDT? | 86.62 |
| CAZy50 ID | 18261 |
| CAZy50 Rep | No, AFZ22099.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1940762 |
| Kingdom | Bacteria |
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | |
| Genus | |
| Species | Nostocales cyanobacterium HT-58-2 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSSSLNSRQR RRFILTRWLI DITPQFFDRA LEKVGVKQFK WLVLLLLILS VPLIITPIRV | 60 |
| WQQAVIALFL VILGQLIMQA EEQESSTEIS QYYHLFMVWL SLVTTLRYFY YRTSYTLNFD | 120 |
| GLVNSIACLL LYAAELYAVL TLALAYFQTL RINERQPVNL STIPQQEWFK VDIYIPTFNE | 180 |
| DVEIVRKTAL AAMACDYAPG KKIVYVLDDG RPERYKENDP RREKFRQRRE QIRQMCEEIG | 240 |
| CIHMTRDNNN HAKAGNINNA FHKTDGELVL ILDCDHIPSR QFLMHTVGFF FDQKVSFVQT | 300 |
| PHWFYNPDPF ERNLLTGGKI PAGNELFYKV LQKGNDFWNA AFFCGSAAII RKSHALEVEG | 360 |
| VAVETVTEDC HTALRLHSRG YKSVYYDKIM VAGLAPDTFS SYVGQQVRWA RGMAQILRVE | 420 |
| NPLFNPKLKL TIPQRICYFS ATSHFLYGYP RLIYAIVPTL FLLFGINPIR GLGLETLSYA | 480 |
| VPHILLALFT NHIIYKTVRF SFWNEIFEFV MAFQAGWVTM LALINPKLGS FNVTDKGVNV | 540 |
| TKRTFDWQSM RGLIIVTAFV FASLFAVPYW LLLRPEDWQA VLVNTLWSGF NLILLIAALL | 600 |
| VGFEQPQVRS AHRLQRRLPV VISSSNQTFR GETINISETG ALISLESWPN LPDEIDVEIM | 660 |
| GDFTARASLT AQVVRVSPVS DTETLLAIDF VNPSRAQMDD LILILYSDVR EWYSQKRQSI | 720 |
| DQPIASLKFL ATSLNRSLRD IKPITRHQVR KRVNAVGELY WDGHFFPGIT TELGVTGLRL | 780 |
| EILSKKARSG DRLLGQEDLH KMRNLKPLVG LLLSREEGNP SPSKFIAEIS TVKEETNGKI | 840 |
| VIDLNFPTEF KQRQGTKIKQ LLQVL | 865 |
Predicted 3D structure by AlphaFold2 with pLDDT = 86.62 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT2(172-354)+GT2(269-486)
| MSSSLNSRQR RRFILTRWLI DITPQFFDRA LEKVGVKQFK WLVLLLLILS VPLIITPIRV | 60 |
| WQQAVIALFL VILGQLIMQA EEQESSTEIS QYYHLFMVWL SLVTTLRYFY YRTSYTLNFD | 120 |
| GLVNSIACLL LYAAELYAVL TLALAYFQTL RINERQPVNL STIPQQEWFK VDIYIPTFNE | 180 |
| DVEIVRKTAL AAMACDYAPG KKIVYVLDDG RPERYKENDP RREKFRQRRE QIRQMCEEIG | 240 |
| CIHMTRDNNN HAKAGNINNA FHKTDGELVL ILDCDHIPSR QFLMHTVGFF FDQKVSFVQT | 300 |
| PHWFYNPDPF ERNLLTGGKI PAGNELFYKV LQKGNDFWNA AFFCGSAAII RKSHALEVEG | 360 |
| VAVETVTEDC HTALRLHSRG YKSVYYDKIM VAGLAPDTFS SYVGQQVRWA RGMAQILRVE | 420 |
| NPLFNPKLKL TIPQRICYFS ATSHFLYGYP RLIYAIVPTL FLLFGINPIR GLGLETLSYA | 480 |
| VPHILLALFT NHIIYKTVRF SFWNEIFEFV MAFQAGWVTM LALINPKLGS FNVTDKGVNV | 540 |
| TKRTFDWQSM RGLIIVTAFV FASLFAVPYW LLLRPEDWQA VLVNTLWSGF NLILLIAALL | 600 |
| VGFEQPQVRS AHRLQRRLPV VISSSNQTFR GETINISETG ALISLESWPN LPDEIDVEIM | 660 |
| GDFTARASLT AQVVRVSPVS DTETLLAIDF VNPSRAQMDD LILILYSDVR EWYSQKRQSI | 720 |
| DQPIASLKFL ATSLNRSLRD IKPITRHQVR KRVNAVGELY WDGHFFPGIT TELGVTGLRL | 780 |
| EILSKKARSG DRLLGQEDLH KMRNLKPLVG LLLSREEGNP SPSKFIAEIS TVKEETNGKI | 840 |
| VIDLNFPTEF KQRQGTKIKQ LLQVL | 865 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.