CAZyme3D

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Entry ID

Information for CAZyme ID: ARU59732.1

Basic Information

GenBank IDARU59732.1
FamilyGT89
Sequence Length536
UniProt IDA0A1Y0IGX8(100,100)Download
Average pLDDT?93.00
CAZy50 ID61749
CAZy50 RepNo, ASS74506.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1903704
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyAlicyclobacillaceae
GenusTumebacillus
SpeciesTumebacillus avium

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRESFKLEKS  PYQVGLFLLV  FVLLGLAFLN  RFVQDDAFIS  FRYADHLASG  LGLVWNEGER60
IEGYTNFLWT  LIMVIPIKLG  IDVVAFSYAA  GLLLFLVTLH  FTYHAAVQVF  ESKAVGLLTI120
ILLGTNYTFS  MYATGGLETQ  LQASLFSMIL  YVLFMGIKRR  KWGIIPLLEI  SVLASLAAMT180
RLDSAVFLIF  IGPLTLFFLL  RDSTSGKQKA  LNFAALALPF  LLLVGGWFLW  KLSYYGNILP240
NTFYAKVGSV  ALEKNGIRFL  GMFFISYWLL  PFPLLALAFA  KRIFTNVYTA  ILSVTVLLWL300
GYIVKVGGDF  MEFRFLVPIL  PFAFMLLAWL  IVKCVKWRWL  QALLALVVVA  GSYSHAVNFD360
TASYRKNIET  RTTLAAHLTN  ENENWDEIGR  VLGDAFNYNR  DVTIAVTAAG  ATPYYAKLRT420
IDMLGLNDAW  IARHGDHHSN  KPGHYRITTF  GYLKEQKVNL  VIGHPWMEQS  NVTPGLITVK480
SLYRYRVWNK  EMLPPDAKMV  RIPIDASWNL  YALYLTNSRE  VDRVISEQGW  NTYPIE536

Predicted 3D structure by AlphaFold2 with pLDDT = 93.00 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT89(17-434)

MRESFKLEKS  PYQVGLFLLV  FVLLGLAFLN  RFVQDDAFIS  FRYADHLASG  LGLVWNEGER60
IEGYTNFLWT  LIMVIPIKLG  IDVVAFSYAA  GLLLFLVTLH  FTYHAAVQVF  ESKAVGLLTI120
ILLGTNYTFS  MYATGGLETQ  LQASLFSMIL  YVLFMGIKRR  KWGIIPLLEI  SVLASLAAMT180
RLDSAVFLIF  IGPLTLFFLL  RDSTSGKQKA  LNFAALALPF  LLLVGGWFLW  KLSYYGNILP240
NTFYAKVGSV  ALEKNGIRFL  GMFFISYWLL  PFPLLALAFA  KRIFTNVYTA  ILSVTVLLWL300
GYIVKVGGDF  MEFRFLVPIL  PFAFMLLAWL  IVKCVKWRWL  QALLALVVVA  GSYSHAVNFD360
TASYRKNIET  RTTLAAHLTN  ENENWDEIGR  VLGDAFNYNR  DVTIAVTAAG  ATPYYAKLRT420
IDMLGLNDAW  IARHGDHHSN  KPGHYRITTF  GYLKEQKVNL  VIGHPWMEQS  NVTPGLITVK480
SLYRYRVWNK  EMLPPDAKMV  RIPIDASWNL  YALYLTNSRE  VDRVISEQGW  NTYPIE536

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help