Information for CAZyme ID: ART95334.1
Basic Information
| GenBank ID | ART95334.1 |
| Family | GH2 |
| Sequence Length | 992 |
| UniProt ID | A0A853KM14(100,100) |
| Average pLDDT? | 95.95 |
| CAZy50 ID | 6756 |
| CAZy50 Rep | No, ANU74277.2 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 47715 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Lacticaseibacillus |
| Species | Lacticaseibacillus rhamnosus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTTAKLWEQP ELTDINRMVP RSHFQTFFPG EDSQPRNYQL LNGTWQFKFL DAPEYAPENF | 60 |
| MNSDFDDQDW DQIPVPSNWQ LQGYGKMHYS DLWYNFPINP PFVPSENPTG LYRRTFTVDE | 120 |
| VVDNEQYIIG FDGADSAFKL YLNGEFIGYS KGARLPSEFD VTQALKQGVN TIAVEVVQWS | 180 |
| DGTYLEDQDM WWLSGLFRDV SLYSRPQNGL YDVQVRTYLL KDYRAGELVV TPIVSGTEPL | 240 |
| KIHYELAKDG AKLIDQVLSA DASLDVTLDD IQAWSAEAPN LYDLTMTVLQ DNEPLEVVRQ | 300 |
| RVGFRQIELN GKTFLVNGKA IKFKGVNMHD YSATKGRVMT RNDFVKNISL MKQNNINAIR | 360 |
| TSHYPKAPYF YDLCDELGMY VIDETDLECH GFELTERYDW ITDDPRWKTA YVDRMRRTLQ | 420 |
| RDKNHPSIII WSLGNESDFG DNFRAMAAYC KREDPTRLVH YEGDFEAEVS DVYSTMYTWL | 480 |
| EHDTKMTMAD VLRKTQKPHI LCEYAHSMGN GPGNLKEYQD LFYGHEQLQG GFIWEWFDQG | 540 |
| VASQKDGQTY YRYGGDFGDQ PNNGNFCIDG LIRPDGNPST ALTEVKKTFE PFQILVRDLP | 600 |
| TQTVTVINRL DFLNSDYFDF GYELEANGQV IADGKLDIPT ILPGHQQTVK LNLDLPEFDP | 660 |
| SVIYNLHLVT HLKNKTAWAN AGTVLSQSVM TLQRPKHQLN HQTIVALQAS ENKTTIEIKG | 720 |
| GANAYRFDKI KGTFTLTHDG RVLIHDGIKM NFWRAPIDND MYLLDDYYNK YFLNLWHEST | 780 |
| REVQLQPQTN GDYVVNLVKQ VGTTNSGWYY QITQRYTLHQ DGSFDLDVIG KASGKRDMAP | 840 |
| EMLPRIGVKM TLPKDFQQVA YDGLGPTENY SDSHQAAYYS HFTSRVDDLF VNYVKPQENG | 900 |
| NHMDTDRLAL MNGQDQLTLT MMKPLNFSVS NYADETLEAA KHTIDLKKSD ELNLYLDFRQ | 960 |
| NGLGTNSCGQ NQLKRHRCKF DDFELGFNFK IN | 992 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.95 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH2(32-879)
| 0 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.