Information for CAZyme ID: ARS42489.1
Basic Information
| GenBank ID | ARS42489.1 |
| Family | CE4, GH18, GT2 |
| Sequence Length | 1134 |
| UniProt ID | A0A1X9ZBE1(100,100) |
| Average pLDDT? | 84.72 |
| CAZy50 ID | 8939 |
| CAZy50 Rep | No, QTE63424.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1986952 |
| Kingdom | Bacteria |
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | |
| Species | Sphingobacteriaceae bacterium GW460-11-11-14-LB5 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSGKQIFQTE TKRRWHTFTW VSRTFFLVFI GAIICVVYTL SSVQAPNLPF INTNTPLTEK | 60 |
| QLEKLKKSQQ YRDFTIEKSK LQKIKRDREH RILTHRGNSK RINMAFYVSW ASTVSKSLPD | 120 |
| LKRNIGHLDM VATESFFLNG DSIVDKADTA ALKVIHKAKK SAIAVVSNYN KDHWDGAAVR | 180 |
| RLLNDQPAQQ KLIYDLIAIT KKYGYRGINI DFEELNLENS DSFNAFMKNL YGQFHAEKLI | 240 |
| VSQDISPEND DYKPEILQKY NDYIVLMAYD QHTEQSNAGD ISHQEWVEEK LDDICSKVDA | 300 |
| SKVILALACY GYDWPQNSVG KSVTYEDAMT SAVNYKSKIN YDPASANLNY TYNDGSGIKH | 360 |
| EVYFTDAATY FNLIRKADDW DIAGIALWRL GSEDKRLWSF ISNDLSLDTL KKKPFDLRKI | 420 |
| ASLNMGGISY LGDGEILDLI STPTPGSVKF TLKKDNFSIA DQKYTRLPEQ YVIKRFGEAD | 480 |
| KKIALTFDDG PDPVYTPQVL NILRQEKVPG CFFVVGIMAE QNMELLRQEY NDGYEIGNHT | 540 |
| FFHPDMSAIG PRRVKFELNA TRRLIEAVTG HSTILFRAPF NADAEPQNIS EILPVAQSRK | 600 |
| ENYINVGEYI DPEDWEPGKT ADQIFNEVVK QQDNGNILLL HDAGGNREAT VAALPRIIKF | 660 |
| FKAKGYTFTT VGDLMGKKRS ELMPAVKSTA NSGFSGSGDY FFINFFYYGN MILNIIFSVA | 720 |
| IVLAILRTIF IAYLAIRQRK RAKQHAGKLI TNPSAKVSII IPAYNEEVTA VQTINSLLKT | 780 |
| TYPDFELIFV DDGSKDKTFE IIDQHFGNHP QVKVFRKANG GKASALNYGI SKASADFVVC | 840 |
| IDADTQLKDD AVTELMRYFY SDQIAAVAGT VKVGNANNII TKWQSIEYIT AQNMDRRAFD | 900 |
| LLNTITVVPG AIGAFRKNVI VEIGGFTIDT LAEDCDLTMR ILKAGYRVKN CDTAIAYTEA | 960 |
| PETVNMLLKQ RFRWSFGVMQ SFWKNRKTLL NKKYGYFGMV GMPNILIYQI ILPLFSPLAD | 1020 |
| LFMFISLISG LFSLSAINNL TLTGFSGILS LHNGFGQVLF YYIIFIVVDM IFAAMAFRME | 1080 |
| KEKYTNLLYI FPQRFFWRQL MYVVLFRSFR KAIKGELETW GTLKRTGNVK EQLA | 1134 |
Predicted 3D structure by AlphaFold2 with pLDDT = 84.72 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH18(137-395)+CE4(479-583)+GT2(756-977)
| MSGKQIFQTE TKRRWHTFTW VSRTFFLVFI GAIICVVYTL SSVQAPNLPF INTNTPLTEK | 60 |
| QLEKLKKSQQ YRDFTIEKSK LQKIKRDREH RILTHRGNSK RINMAFYVSW ASTVSKSLPD | 120 |
| LKRNIGHLDM VATESFFLNG DSIVDKADTA ALKVIHKAKK SAIAVVSNYN KDHWDGAAVR | 180 |
| RLLNDQPAQQ KLIYDLIAIT KKYGYRGINI DFEELNLENS DSFNAFMKNL YGQFHAEKLI | 240 |
| VSQDISPEND DYKPEILQKY NDYIVLMAYD QHTEQSNAGD ISHQEWVEEK LDDICSKVDA | 300 |
| SKVILALACY GYDWPQNSVG KSVTYEDAMT SAVNYKSKIN YDPASANLNY TYNDGSGIKH | 360 |
| EVYFTDAATY FNLIRKADDW DIAGIALWRL GSEDKRLWSF ISNDLSLDTL KKKPFDLRKI | 420 |
| ASLNMGGISY LGDGEILDLI STPTPGSVKF TLKKDNFSIA DQKYTRLPEQ YVIKRFGEAD | 480 |
| KKIALTFDDG PDPVYTPQVL NILRQEKVPG CFFVVGIMAE QNMELLRQEY NDGYEIGNHT | 540 |
| FFHPDMSAIG PRRVKFELNA TRRLIEAVTG HSTILFRAPF NADAEPQNIS EILPVAQSRK | 600 |
| ENYINVGEYI DPEDWEPGKT ADQIFNEVVK QQDNGNILLL HDAGGNREAT VAALPRIIKF | 660 |
| FKAKGYTFTT VGDLMGKKRS ELMPAVKSTA NSGFSGSGDY FFINFFYYGN MILNIIFSVA | 720 |
| IVLAILRTIF IAYLAIRQRK RAKQHAGKLI TNPSAKVSII IPAYNEEVTA VQTINSLLKT | 780 |
| TYPDFELIFV DDGSKDKTFE IIDQHFGNHP QVKVFRKANG GKASALNYGI SKASADFVVC | 840 |
| IDADTQLKDD AVTELMRYFY SDQIAAVAGT VKVGNANNII TKWQSIEYIT AQNMDRRAFD | 900 |
| LLNTITVVPG AIGAFRKNVI VEIGGFTIDT LAEDCDLTMR ILKAGYRVKN CDTAIAYTEA | 960 |
| PETVNMLLKQ RFRWSFGVMQ SFWKNRKTLL NKKYGYFGMV GMPNILIYQI ILPLFSPLAD | 1020 |
| LFMFISLISG LFSLSAINNL TLTGFSGILS LHNGFGQVLF YYIIFIVVDM IFAAMAFRME | 1080 |
| KEKYTNLLYI FPQRFFWRQL MYVVLFRSFR KAIKGELETW GTLKRTGNVK EQLA | 1134 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.