Information for CAZyme ID: ARN56708.1
Basic Information
| GenBank ID | ARN56708.1 |
| Family | GT20 |
| Sequence Length | 721 |
| UniProt ID | A0A1W6LLN9(100,100) |
| Average pLDDT? | 89.14 |
| CAZy50 ID | 30214 |
| CAZy50 Rep | No, AMM41760.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1941349 |
| Kingdom | Bacteria |
| Phylum | Planctomycetota |
| Class | Phycisphaerae |
| Order | Sedimentisphaerales |
| Family | Sedimentisphaeraceae |
| Genus | Sedimentisphaera |
| Species | Sedimentisphaera salicampi |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSRLVIISNR LPVNVTKQDG KFGYRDSVGG VATGISSLTD HGEKIWFGWP GIPAEALTER | 60 |
| EKKEASETLS QKGCYPVFLS TSQIDNFYSG FCNRTIWPLF HYFSELSIYD ESFWQAYKSS | 120 |
| NQLFCDELIK HVSEDDFIWV HDYQLMLLPE MIREKLPEAQ IGFFLHIPFP SFEIMRELPR | 180 |
| RSELLNGILG ADLIGFHEYD YVRHFLSSVY RICGCEHNLS KLQIDNRQIR VDAFPMGIDY | 240 |
| EKYASIPAKF KNKPVEEEKP RIILSVDRLD YTKGIPNRLE AYESFLSKYP EYHGKVRLVM | 300 |
| IAVPTRTEVE EYASLRETIE KDVGRINGKY STVDWTPISY MFRSLPFEEL SEFYYRGDVG | 360 |
| LITPLRDGMN LVAKEFIAAQ KNKEHQAVLI LSEMAGAASE LSESIVINPH HKDQIVEAIK | 420 |
| TALDMPQEER AKRNKMMQGR ISRYTVGRWA TEFIVSLKEI KKEQGRLRTK YFTRQHQQKA | 480 |
| VQEYNKAEKR LIMLDYDGTL APFSRLPEDA MPCKDIIETL KGLCANEKNT VVVISGRDKD | 540 |
| TLSNWLGKLP LNLVAEHGAF YKSAGGDWES AVNAENNWKE MIKPILELTV DRTPGSLIEE | 600 |
| KSSSLVWHFR KSEPDLAKLR TQELKDTLMM MAANLNIGVF EGNKIVEVKP VSVNKGQAAG | 660 |
| YWIAKEDWAF IFCAGDDCTD EDMFEAMPEG AVSCKIGKGI SAAKYKLNKP QQLREFLKNL | 720 |
| K | 721 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.14 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT20(2-458)
| MSRLVIISNR LPVNVTKQDG KFGYRDSVGG VATGISSLTD HGEKIWFGWP GIPAEALTER | 60 |
| EKKEASETLS QKGCYPVFLS TSQIDNFYSG FCNRTIWPLF HYFSELSIYD ESFWQAYKSS | 120 |
| NQLFCDELIK HVSEDDFIWV HDYQLMLLPE MIREKLPEAQ IGFFLHIPFP SFEIMRELPR | 180 |
| RSELLNGILG ADLIGFHEYD YVRHFLSSVY RICGCEHNLS KLQIDNRQIR VDAFPMGIDY | 240 |
| EKYASIPAKF KNKPVEEEKP RIILSVDRLD YTKGIPNRLE AYESFLSKYP EYHGKVRLVM | 300 |
| IAVPTRTEVE EYASLRETIE KDVGRINGKY STVDWTPISY MFRSLPFEEL SEFYYRGDVG | 360 |
| LITPLRDGMN LVAKEFIAAQ KNKEHQAVLI LSEMAGAASE LSESIVINPH HKDQIVEAIK | 420 |
| TALDMPQEER AKRNKMMQGR ISRYTVGRWA TEFIVSLKEI KKEQGRLRTK YFTRQHQQKA | 480 |
| VQEYNKAEKR LIMLDYDGTL APFSRLPEDA MPCKDIIETL KGLCANEKNT VVVISGRDKD | 540 |
| TLSNWLGKLP LNLVAEHGAF YKSAGGDWES AVNAENNWKE MIKPILELTV DRTPGSLIEE | 600 |
| KSSSLVWHFR KSEPDLAKLR TQELKDTLMM MAANLNIGVF EGNKIVEVKP VSVNKGQAAG | 660 |
| YWIAKEDWAF IFCAGDDCTD EDMFEAMPEG AVSCKIGKGI SAAKYKLNKP QQLREFLKNL | 720 |
| K | 721 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.